* Info: Detected 1 Lprof instances in node111.
If this is incorrect, rerun with number-processes-per-node=X
__ ______ _____ __ ________ _
/\ \ / / _ \| __ \ \ \ / /____ || |
/ \ \ / /| |_) | |__) | \ \ / / / /_| | _____ __
/ /\ \ \/ / | _ <| ___/ \ \/ / / / _` |/ _ \ \ / /
/ ____ \ / | |_) | | \ / / / (_| | __/\ V /
/_/ \_\/ |____/|_| \/ /_/ \__,_|\___| \_/
Using branch :
Version date : Mon, 18 Nov 2024 11:40:50 +0100
Commit : b58af1ea20
MPI processes : 1
Computation #1/1
Compilation info : mpiifort -g -O3 -fpp -traceback -fno-alias -ip -assume byterecl -convert big_endian -align -march=core-avx2 -fma -axCORE-AVX2 -I/softs/local_intel/phdf5/1.8.20/include -DHAS_PMETIS -I/softs/local_intel/parmetis/403_64/include -DPARMETIS4 -DMETIS5 -DHAS_PTSCOTCH -I/softs/local_intel/ptscotch/6.0.5a/include
Compilation wrapper info :
Compilation user : camus
Compilation date : 2025-01-13 17:18:55
Compilation MPI version : Intel(R) MPI Library for Linux* OS, Version 2021.10 Build 20230619 (id: c2e19c2f3e)
AVBP version : 7.15.0
Reading input file version : 7.15.0
----> Reading run parameters : .//run.params
----> Using NATURAL reordering
----> command.dat file API is enabled
----> Using TTGC
with UNCLOSED boundary terms
----> Using colin viscosity model
>>>>> WARNING
>>>>> No solution storage required: additional variables are deactivated!
>>>>> WARNING
>>>>> Temporals are not computed!
----> Reading mesh : .//../Mesh/Bench_simple.mesh.h5
Meshfile signature: e736f2c3c25f98227815b524d9568f9e
----> Initialize the solution writers (1 writers)
>>>>> WARNING
>>>>> No instantaneous solution storage required: the calculation of additional variables is deactivated.
Checking TFLES table parameters...
Flame thickening is applied with fthick = 17.00
----> Reading boundary conditions in asciibound file : .//../Mesh/Bench_simple.asciiBound.key
_______________________________________________________________________________________
| Boundary patches (no reordering) |
|______________________________________________________________________________________|
| Patch number Patch name Boundary condition |
| ------------ ---------- ------------------ |
| 1 INLET INLET_RELAX_UVW_T_Y |
| 2 OUTLET OUTLET_RELAX_P |
| 3 WALL WALL_NOSLIP_ADIAB |
|______________________________________________________________________________________|
______________________________________________________________
| Info on initial grid |
|_____________________________________________________________|
| number of dimensions : 3 |
| number of nodes : 514475 |
| number of cells : 2958592 |
| - tetrahedra : 2958592 |
| number of cell per group : 64 |
| number of boundary nodes : 48048 |
| number of periodic nodes : 0 |
| number of axi-periodic nodes : 0 |
|_____________________________________________________________|
| After partitioning |
|_____________________________________________________________|
| number of nodes : 514475 |
| extra nodes due to partitioning : 0 [+ 0.00‰] |
|_____________________________________________________________|
______________________________________________________________
| Partitioning Quality |
|_____________________________________________________________|
| Maximum number of neighbors : 0.00 |
| Average number of neighbors : 0.00 |
| Maximum number of exchange nodes : 0.00 |
| Average number of exchange nodes : 0.00 |
|_____________________________________________________________|
----> Reading initial solution : .//../Mesh/Bench_simple.h5
----> Reading took 0.145s
______________________________________________________________
| Info on chemistry |
|_____________________________________________________________|
| Kinetic scheme : CH4-AIR-2S-CM2_FLAMMABLE |
| Validity range : 300K/1bar |
| |
| Chemical reaction #1 |
| fthick : 1.70000000E+01 |
| Preexponential / fthick [SI] : 2.00000000E+09 |
| Activation temperature [K] : 1.76130282E+04 |
| |
| Chemical reaction #2 |
| fthick : 1.70000000E+01 |
| Preexponential / fthick [SI] : 2.00000000E+06 |
| Activation temperature [K] : 6.03875251E+03 |
|_____________________________________________________________|
______________________________________________________________
| Info on initial solution |
|_____________________________________________________________|
| number of Navier-Stokes equations : 5 |
| number of species : 6 |
| number of reactions : 2 |
| number of tpf equations : 0 |
| number of fictive species : 0 |
| initial iteration : 0 |
| initial time : 0.00000000E+00 |
|_____________________________________________________________|
----> Reading solutbound : .//../Mesh/Bench_simple.solutBound.h5
- Using 6.X format
----> Reading took 0.015s
----> Initialising metrics
----> Total volume of the mesh [m3] : 1.44077204E-01
----> Smallest cell volume [m3] : 2.97811897E-11
----> Found cached wall distance computation. Checking: ./ywall.h5
> Signatures match
----> Reading cached wall distance computation: ./ywall.h5
----> Reading took 0.005s
----> Boundary MPIs: 1
----> End pre-processing.
________________________________________________________________________________________________________
----> Starts the temporal loop.
----> End computation.
________________________________________________________________________________________________________
____________________________________________________________________________________________
| 1 MPI tasks Elapsed real time [s] [s.cores] [h.cores] |
|___________________________________________________________________________________________|
| AVBP : 2415.77 2.4158E+03 6.7105E-01 |
| Temporal loop : 2388.95 2.3890E+03 6.6360E-01 |
| Per simulated second : 4.8341E+07 4.8341E+07 1.3428E+04 |
| Per iteration : 11.9448 1.1945E+01 |
|-------------------------------------------------------------------------------------------|
| RCT [s.mpi/node/it] : 2.32173619E-05 |
|___________________________________________________________________________________________|
----> Initial physical time : 0.00000000E+00
Initial iteration : 0
Initial timestep : 2.46481884E-07
----> Final physical time : 4.94188563E-05
Final iteration : 200
Final timestep : 2.47527782E-07
----> Simulated physical time : 4.94188563E-05
Simulated iterations : 200
________________________________________________________________________________________________________
TIMERS
________________________________________________________________________________________________________
Prints relevant timers and breaks down percentage regarding reference timers.
> The 'Total slave simulation' time corresponds to the 1st level, and is measured by slave_timer (sum of pre temporal loop, temporal loop and post temporal loop).
> The 'Computation' time corresponds to the time integration loops, and is measured by rungekutta_timer.
> Levels are depicted using [X.Y.Z. ...] lists. The number of entry in the list corresponds to the level.
> References to the upper level is made to compute the contribution of one sub-level to its parent level.
> The times displayed are those of the master processor.
> For each timer, the minimum, maximum and mean values for all processors are also shown in the 3 right-hand columns.
> A json file 'timers.json' containing all the data is also available in the temporal output directory.
----- 1st level timers
time [s] | relative to [ min [s] mean [s] max [s] ]
| tot. slave [%] [ ]
> [0] Total slave simulation : 2.4158E+03 | 100.00% [ 2.4158E+03 2.4158E+03 2.4158E+03 ]
----- 2nd level timers
time [s] | relative to [ min [s] mean [s] max [s] ]
| tot. slave [%] [ ]
> > [0.1] Pre temporal loop : 2.6810E+01 | 1.11% [ 2.6810E+01 2.6810E+01 2.6810E+01 ]
> > [0.2] Temporal loop : 2.3890E+03 | 98.89% [ 2.3890E+03 2.3890E+03 2.3890E+03 ]
> > [0.2a] Temporal loop without IO : 2.3890E+03 | 98.89% [ 2.3890E+03 2.3890E+03 2.3890E+03 ]
> > [0.3] Post temporal loop : 1.2818E-02 | 0.00% [ 1.2818E-02 1.2818E-02 1.2818E-02 ]
> > [0.4] Point to Point communications : 3.6274E-02 | 0.00% [ 3.6274E-02 3.6274E-02 3.6274E-02 ]
----- 3rd level timers
time [s] | relative to | relative to [ min [s] mean [s] max [s] ]
| tot. slave [%] | upper level [%] [ ]
> > [0.1] Pre temporal loop : 2.6810E+01 | 1.11% [ 2.6810E+01 2.6810E+01 2.6810E+01 ]
> > > [0.1.1] Build online postprocessing objects : 0.0000E+00 | 0.00% | 0.00% [ 0.0000E+00 0.0000E+00 0.0000E+00 ]
> > [0.2] Temporal loop : 2.3890E+03 | 98.89% [ 2.3890E+03 2.3890E+03 2.3890E+03 ]
> > > [0.2.1] Computation : 2.3889E+03 | 98.89% | 100.00% [ 2.3889E+03 2.3889E+03 2.3889E+03 ]
> > > [0.2.2] Temporal post-processing : 0.0000E+00 | 0.00% | 0.00% [ 0.0000E+00 0.0000E+00 0.0000E+00 ]
> > > [0.2.3] Instantaneous solution post-processing : 0.0000E+00 | 0.00% | 0.00% [ 0.0000E+00 0.0000E+00 0.0000E+00 ]
> > > [0.2.4] Average solution post-processing : 0.0000E+00 | 0.00% | 0.00% [ 0.0000E+00 0.0000E+00 0.0000E+00 ]
> > > [0.2.5] Online post-processing compute and storage : 0.0000E+00 | 0.00% | 0.00% [ 0.0000E+00 0.0000E+00 0.0000E+00 ]
----- 4th level timers: focus on Computation level (rungekutta_timer)
time [s] | relative to | relative to | relative to [ min [s] mean [s] max [s] ]
| tot. slave [%] | computation [%]| upper level [%][ ]
> > > [0.2.1] Computation : 2.3889E+03 | 98.89% | 100.00% [ 2.3889E+03 2.3889E+03 2.3889E+03 ]
> > > > [0.2.1.1] Convective scheme : 2.9976E+02 | 12.41% | 12.55% | 12.55% [ 2.9976E+02 2.9976E+02 2.9976E+02 ]
> > > > [0.2.1.2] Diffusion operator : 7.6527E+02 | 31.68% | 32.03% | 32.03% [ 7.6527E+02 7.6527E+02 7.6527E+02 ]
> > > > [0.2.1.4] Time-step calculation : 6.5430E+01 | 2.71% | 2.74% | 2.74% [ 6.5430E+01 6.5430E+01 6.5430E+01 ]
> > > > [0.2.1.5] Transport calculation : 8.4478E+00 | 0.35% | 0.35% | 0.35% [ 8.4478E+00 8.4478E+00 8.4478E+00 ]
> > > > [0.2.1.6] Thermo calculation : 1.3496E+01 | 0.56% | 0.56% | 0.56% [ 1.3496E+01 1.3496E+01 1.3496E+01 ]
> > > > [0.2.1.7] Gradient calculation : 2.1155E+02 | 8.76% | 8.86% | 8.86% [ 2.1155E+02 2.1155E+02 2.1155E+02 ]
> > > > [0.2.1.8] Boundary : 1.9376E+01 | 0.80% | 0.81% | 0.81% [ 1.9376E+01 1.9376E+01 1.9376E+01 ]
> > > > [0.2.1.9] Turbulent viscosity model : 4.8540E+01 | 2.01% | 2.03% | 2.03% [ 4.8540E+01 4.8540E+01 4.8540E+01 ]
> > > > [0.2.1.10] Combustion (source term + TFLES + efcy + efcy I0) : 2.1719E+02 | 8.99% | 9.09% | 9.09% [ 2.1719E+02 2.1719E+02 2.1719E+02 ]
> > > > > [0.2.1.10.1] Chemical source terms calculation : 1.7473E+02 | 7.23% | 7.31% | 80.45% [ 1.7473E+02 1.7473E+02 1.7473E+02 ]
> > > > > [0.2.1.10.2] TFLES model calculation : 0.0000E+00 | 0.00% | 0.00% | 0.00% [ 0.0000E+00 0.0000E+00 0.0000E+00 ]
> > > > > [0.2.1.10.3] Efficiency function calculation : 4.2457E+01 | 1.76% | 1.78% | 19.55% [ 4.2457E+01 4.2457E+01 4.2457E+01 ]
> > > > > [0.2.1.10.4] Efficiency I0 function calculation : 0.0000E+00 | 0.00% | 0.00% | 0.00% [ 0.0000E+00 0.0000E+00 0.0000E+00 ]
> > > > [0.2.1.11] Artificial viscosity : 2.6832E+02 | 11.11% | 11.23% | 11.23% [ 2.6832E+02 2.6832E+02 2.6832E+02 ]
> > > > [0.2.1.17] Source terms : 0.0000E+00 | 0.00% | 0.00% | 0.00% [ 0.0000E+00 0.0000E+00 0.0000E+00 ]
----> End of AVBP session
----> Found 3 warning messages for this computation, check your output file!
***** Memory usage (system): Max: 2238.977 MB (rank:0) Min: 2238.977 MB (rank:0) Ave: 2238.977 MB Std: 0.000 MB
***** Maximum memory (mod_alloc) : 1887492320 B ( 1.800053E+03 MB)
IPL WARN> unknown option 'bunch'
Your experiment path is /scratch/exter/camus/DATASET/SIMPLE/Run/test_avbp_200iter_m1-36_bunch/tools/lprof_npsu_run_0
To display your profiling results:
########################################################################################################################################################
# LEVEL | REPORT | COMMAND #
########################################################################################################################################################
# Functions | Cluster-wide | maqao lprof -df xp=/scratch/exter/camus/DATASET/SIMPLE/Run/test_avbp_200iter_m1-36_bunch/tools/lprof_npsu_run_0 #
# Functions | Per-node | maqao lprof -df -dn xp=/scratch/exter/camus/DATASET/SIMPLE/Run/test_avbp_200iter_m1-36_bunch/tools/lprof_npsu_run_0 #
# Functions | Per-process | maqao lprof -df -dp xp=/scratch/exter/camus/DATASET/SIMPLE/Run/test_avbp_200iter_m1-36_bunch/tools/lprof_npsu_run_0 #
# Functions | Per-thread | maqao lprof -df -dt xp=/scratch/exter/camus/DATASET/SIMPLE/Run/test_avbp_200iter_m1-36_bunch/tools/lprof_npsu_run_0 #
# Loops | Cluster-wide | maqao lprof -dl xp=/scratch/exter/camus/DATASET/SIMPLE/Run/test_avbp_200iter_m1-36_bunch/tools/lprof_npsu_run_0 #
# Loops | Per-node | maqao lprof -dl -dn xp=/scratch/exter/camus/DATASET/SIMPLE/Run/test_avbp_200iter_m1-36_bunch/tools/lprof_npsu_run_0 #
# Loops | Per-process | maqao lprof -dl -dp xp=/scratch/exter/camus/DATASET/SIMPLE/Run/test_avbp_200iter_m1-36_bunch/tools/lprof_npsu_run_0 #
# Loops | Per-thread | maqao lprof -dl -dt xp=/scratch/exter/camus/DATASET/SIMPLE/Run/test_avbp_200iter_m1-36_bunch/tools/lprof_npsu_run_0 #
########################################################################################################################################################
* Info: Detected 2 Lprof instances in node111.
If this is incorrect, rerun with number-processes-per-node=X
__ ______ _____ __ ________ _
/\ \ / / _ \| __ \ \ \ / /____ || |
/ \ \ / /| |_) | |__) | \ \ / / / /_| | _____ __
/ /\ \ \/ / | _ <| ___/ \ \/ / / / _` |/ _ \ \ / /
/ ____ \ / | |_) | | \ / / / (_| | __/\ V /
/_/ \_\/ |____/|_| \/ /_/ \__,_|\___| \_/
Using branch :
Version date : Mon, 18 Nov 2024 11:40:50 +0100
Commit : b58af1ea20
MPI processes : 2
Computation #1/1
Compilation info : mpiifort -g -O3 -fpp -traceback -fno-alias -ip -assume byterecl -convert big_endian -align -march=core-avx2 -fma -axCORE-AVX2 -I/softs/local_intel/phdf5/1.8.20/include -DHAS_PMETIS -I/softs/local_intel/parmetis/403_64/include -DPARMETIS4 -DMETIS5 -DHAS_PTSCOTCH -I/softs/local_intel/ptscotch/6.0.5a/include
Compilation wrapper info :
Compilation user : camus
Compilation date : 2025-01-13 17:18:55
Compilation MPI version : Intel(R) MPI Library for Linux* OS, Version 2021.10 Build 20230619 (id: c2e19c2f3e)
AVBP version : 7.15.0
Reading input file version : 7.15.0
----> Reading run parameters : .//run.params
----> Using NATURAL reordering
----> command.dat file API is enabled
----> Using TTGC
with UNCLOSED boundary terms
----> Using colin viscosity model
>>>>> WARNING
>>>>> No solution storage required: additional variables are deactivated!
>>>>> WARNING
>>>>> Temporals are not computed!
----> Reading mesh : .//../Mesh/Bench_simple.mesh.h5
Meshfile signature: e736f2c3c25f98227815b524d9568f9e
----> el2part file found: el2part_2.h5
Use existing partitioning
>> Reading ...took 0.112s
----> Initialize the solution writers (2 writers)
>>>>> WARNING
>>>>> No instantaneous solution storage required: the calculation of additional variables is deactivated.
Checking TFLES table parameters...
Flame thickening is applied with fthick = 17.00
----> Reading boundary conditions in asciibound file : .//../Mesh/Bench_simple.asciiBound.key
_______________________________________________________________________________________
| Boundary patches (no reordering) |
|______________________________________________________________________________________|
| Patch number Patch name Boundary condition |
| ------------ ---------- ------------------ |
| 1 INLET INLET_RELAX_UVW_T_Y |
| 2 OUTLET OUTLET_RELAX_P |
| 3 WALL WALL_NOSLIP_ADIAB |
|______________________________________________________________________________________|
______________________________________________________________
| Info on initial grid |
|_____________________________________________________________|
| number of dimensions : 3 |
| number of nodes : 514475 |
| number of cells : 2958592 |
| - tetrahedra : 2958592 |
| number of cell per group : 64 |
| number of boundary nodes : 48048 |
| number of periodic nodes : 0 |
| number of axi-periodic nodes : 0 |
|_____________________________________________________________|
| After partitioning |
|_____________________________________________________________|
| number of nodes : 520934 |
| extra nodes due to partitioning : 6459 [+ 1.26‰] |
|_____________________________________________________________|
______________________________________________________________
| Partitioning Quality |
|_____________________________________________________________|
| Maximum number of neighbors : 1.00 |
| Average number of neighbors : 1.00 |
| Maximum number of exchange nodes : 6459.00 |
| Average number of exchange nodes : 6459.00 |
|_____________________________________________________________|
----> Reading initial solution : .//../Mesh/Bench_simple.h5
----> Reading took 0.056s
______________________________________________________________
| Info on chemistry |
|_____________________________________________________________|
| Kinetic scheme : CH4-AIR-2S-CM2_FLAMMABLE |
| Validity range : 300K/1bar |
| |
| Chemical reaction #1 |
| fthick : 1.70000000E+01 |
| Preexponential / fthick [SI] : 2.00000000E+09 |
| Activation temperature [K] : 1.76130282E+04 |
| |
| Chemical reaction #2 |
| fthick : 1.70000000E+01 |
| Preexponential / fthick [SI] : 2.00000000E+06 |
| Activation temperature [K] : 6.03875251E+03 |
|_____________________________________________________________|
______________________________________________________________
| Info on initial solution |
|_____________________________________________________________|
| number of Navier-Stokes equations : 5 |
| number of species : 6 |
| number of reactions : 2 |
| number of tpf equations : 0 |
| number of fictive species : 0 |
| initial iteration : 0 |
| initial time : 0.00000000E+00 |
|_____________________________________________________________|
----> Reading solutbound : .//../Mesh/Bench_simple.solutBound.h5
- Using 6.X format
----> Reading took 0.002s
----> Initialising metrics
----> Total volume of the mesh [m3] : 1.44077204E-01
----> Smallest cell volume [m3] : 2.97811897E-11
----> Found cached wall distance computation. Checking: ./ywall.h5
> Signatures match
----> Reading cached wall distance computation: ./ywall.h5
----> Reading took 0.004s
----> Boundary MPIs: 2
----> End pre-processing.
________________________________________________________________________________________________________
----> Starts the temporal loop.
----> End computation.
________________________________________________________________________________________________________
____________________________________________________________________________________________
| 2 MPI tasks Elapsed real time [s] [s.cores] [h.cores] |
|___________________________________________________________________________________________|
| AVBP : 1224.96 2.4499E+03 6.8053E-01 |
| Temporal loop : 1213.43 2.4269E+03 6.7413E-01 |
| Per simulated second : 2.4554E+07 4.9108E+07 1.3641E+04 |
| Per iteration : 6.0671 1.2134E+01 |
|-------------------------------------------------------------------------------------------|
| RCT [s.mpi/node/it] : 2.35857860E-05 |
|___________________________________________________________________________________________|
----> Initial physical time : 0.00000000E+00
Initial iteration : 0
Initial timestep : 2.46481884E-07
----> Final physical time : 4.94188563E-05
Final iteration : 200
Final timestep : 2.47527782E-07
----> Simulated physical time : 4.94188563E-05
Simulated iterations : 200
________________________________________________________________________________________________________
TIMERS
________________________________________________________________________________________________________
Prints relevant timers and breaks down percentage regarding reference timers.
> The 'Total slave simulation' time corresponds to the 1st level, and is measured by slave_timer (sum of pre temporal loop, temporal loop and post temporal loop).
> The 'Computation' time corresponds to the time integration loops, and is measured by rungekutta_timer.
> Levels are depicted using [X.Y.Z. ...] lists. The number of entry in the list corresponds to the level.
> References to the upper level is made to compute the contribution of one sub-level to its parent level.
> The times displayed are those of the master processor.
> For each timer, the minimum, maximum and mean values for all processors are also shown in the 3 right-hand columns.
> A json file 'timers.json' containing all the data is also available in the temporal output directory.
----- 1st level timers
time [s] | relative to [ min [s] mean [s] max [s] ]
| tot. slave [%] [ ]
> [0] Total slave simulation : 1.2250E+03 | 100.00% [ 1.2250E+03 1.2250E+03 1.2250E+03 ]
----- 2nd level timers
time [s] | relative to [ min [s] mean [s] max [s] ]
| tot. slave [%] [ ]
> > [0.1] Pre temporal loop : 1.1515E+01 | 0.94% [ 1.1514E+01 1.1514E+01 1.1515E+01 ]
> > [0.2] Temporal loop : 1.2134E+03 | 99.06% [ 1.2134E+03 1.2134E+03 1.2134E+03 ]
> > [0.2a] Temporal loop without IO : 1.2134E+03 | 99.06% [ 1.2134E+03 1.2134E+03 1.2134E+03 ]
> > [0.3] Post temporal loop : 1.1073E-02 | 0.00% [ 1.0291E-02 1.0682E-02 1.1073E-02 ]
> > [0.4] Point to Point communications : 1.0430E+01 | 0.85% [ 8.3799E+00 9.4049E+00 1.0430E+01 ]
----- 3rd level timers
time [s] | relative to | relative to [ min [s] mean [s] max [s] ]
| tot. slave [%] | upper level [%] [ ]
> > [0.1] Pre temporal loop : 1.1515E+01 | 0.94% [ 1.1514E+01 1.1514E+01 1.1515E+01 ]
> > > [0.1.1] Build online postprocessing objects : 0.0000E+00 | 0.00% | 0.00% [ 0.0000E+00 0.0000E+00 0.0000E+00 ]
> > [0.2] Temporal loop : 1.2134E+03 | 99.06% [ 1.2134E+03 1.2134E+03 1.2134E+03 ]
> > > [0.2.1] Computation : 1.2134E+03 | 99.06% | 100.00% [ 1.2110E+03 1.2122E+03 1.2134E+03 ]
> > > [0.2.2] Temporal post-processing : 0.0000E+00 | 0.00% | 0.00% [ 0.0000E+00 0.0000E+00 0.0000E+00 ]
> > > [0.2.3] Instantaneous solution post-processing : 0.0000E+00 | 0.00% | 0.00% [ 0.0000E+00 0.0000E+00 0.0000E+00 ]
> > > [0.2.4] Average solution post-processing : 0.0000E+00 | 0.00% | 0.00% [ 0.0000E+00 0.0000E+00 0.0000E+00 ]
> > > [0.2.5] Online post-processing compute and storage : 0.0000E+00 | 0.00% | 0.00% [ 0.0000E+00 0.0000E+00 0.0000E+00 ]
----- 4th level timers: focus on Computation level (rungekutta_timer)
time [s] | relative to | relative to | relative to [ min [s] mean [s] max [s] ]
| tot. slave [%] | computation [%]| upper level [%][ ]
> > > [0.2.1] Computation : 1.2134E+03 | 99.06% | 100.00% [ 1.2110E+03 1.2122E+03 1.2134E+03 ]
> > > > [0.2.1.1] Convective scheme : 1.5175E+02 | 12.39% | 12.51% | 12.51% [ 1.5175E+02 1.5202E+02 1.5229E+02 ]
> > > > [0.2.1.2] Diffusion operator : 3.8413E+02 | 31.36% | 31.66% | 31.66% [ 3.8284E+02 3.8348E+02 3.8413E+02 ]
> > > > [0.2.1.4] Time-step calculation : 3.3202E+01 | 2.71% | 2.74% | 2.74% [ 3.3202E+01 3.3418E+01 3.3634E+01 ]
> > > > [0.2.1.5] Transport calculation : 4.5070E+00 | 0.37% | 0.37% | 0.37% [ 4.2933E+00 4.4002E+00 4.5070E+00 ]
> > > > [0.2.1.6] Thermo calculation : 6.9970E+00 | 0.57% | 0.58% | 0.58% [ 6.7802E+00 6.8886E+00 6.9970E+00 ]
> > > > [0.2.1.7] Gradient calculation : 1.0700E+02 | 8.74% | 8.82% | 8.82% [ 1.0700E+02 1.0836E+02 1.0972E+02 ]
> > > > [0.2.1.8] Boundary : 1.3381E+01 | 1.09% | 1.10% | 1.10% [ 5.9820E+00 9.6815E+00 1.3381E+01 ]
> > > > [0.2.1.9] Turbulent viscosity model : 2.4206E+01 | 1.98% | 1.99% | 1.99% [ 2.4432E+01 2.4319E+01 2.4206E+01 ]
> > > > [0.2.1.10] Combustion (source term + TFLES + efcy + efcy I0) : 1.1076E+02 | 9.04% | 9.13% | 9.13% [ 1.1039E+02 1.1058E+02 1.1076E+02 ]
> > > > > [0.2.1.10.1] Chemical source terms calculation : 8.9040E+01 | 7.27% | 7.34% | 80.39% [ 8.8961E+01 8.9001E+01 8.9040E+01 ]
> > > > > [0.2.1.10.2] TFLES model calculation : 0.0000E+00 | 0.00% | 0.00% | 0.00% [ 0.0000E+00 0.0000E+00 0.0000E+00 ]
> > > > > [0.2.1.10.3] Efficiency function calculation : 2.1725E+01 | 1.77% | 1.79% | 19.61% [ 2.1426E+01 2.1575E+01 2.1725E+01 ]
> > > > > [0.2.1.10.4] Efficiency I0 function calculation : 0.0000E+00 | 0.00% | 0.00% | 0.00% [ 0.0000E+00 0.0000E+00 0.0000E+00 ]
> > > > [0.2.1.11] Artificial viscosity : 1.3415E+02 | 10.95% | 11.06% | 11.06% [ 1.3415E+02 1.3464E+02 1.3514E+02 ]
> > > > [0.2.1.17] Source terms : 0.0000E+00 | 0.00% | 0.00% | 0.00% [ 0.0000E+00 0.0000E+00 0.0000E+00 ]
----> End of AVBP session
----> Found 3 warning messages for this computation, check your output file!
***** Memory usage (system): Max: 1242.172 MB (rank:0) Min: 1170.777 MB (rank:1) Ave: 1206.475 MB Std: 35.697 MB
***** Maximum memory (mod_alloc) : 977707676 B ( 9.324147E+02 MB)
IPL WARN> unknown option 'bunch'
Your experiment path is /scratch/exter/camus/DATASET/SIMPLE/Run/test_avbp_200iter_m1-36_bunch/tools/lprof_npsu_run_1
To display your profiling results:
########################################################################################################################################################
# LEVEL | REPORT | COMMAND #
########################################################################################################################################################
# Functions | Cluster-wide | maqao lprof -df xp=/scratch/exter/camus/DATASET/SIMPLE/Run/test_avbp_200iter_m1-36_bunch/tools/lprof_npsu_run_1 #
# Functions | Per-node | maqao lprof -df -dn xp=/scratch/exter/camus/DATASET/SIMPLE/Run/test_avbp_200iter_m1-36_bunch/tools/lprof_npsu_run_1 #
# Functions | Per-process | maqao lprof -df -dp xp=/scratch/exter/camus/DATASET/SIMPLE/Run/test_avbp_200iter_m1-36_bunch/tools/lprof_npsu_run_1 #
# Functions | Per-thread | maqao lprof -df -dt xp=/scratch/exter/camus/DATASET/SIMPLE/Run/test_avbp_200iter_m1-36_bunch/tools/lprof_npsu_run_1 #
# Loops | Cluster-wide | maqao lprof -dl xp=/scratch/exter/camus/DATASET/SIMPLE/Run/test_avbp_200iter_m1-36_bunch/tools/lprof_npsu_run_1 #
# Loops | Per-node | maqao lprof -dl -dn xp=/scratch/exter/camus/DATASET/SIMPLE/Run/test_avbp_200iter_m1-36_bunch/tools/lprof_npsu_run_1 #
# Loops | Per-process | maqao lprof -dl -dp xp=/scratch/exter/camus/DATASET/SIMPLE/Run/test_avbp_200iter_m1-36_bunch/tools/lprof_npsu_run_1 #
# Loops | Per-thread | maqao lprof -dl -dt xp=/scratch/exter/camus/DATASET/SIMPLE/Run/test_avbp_200iter_m1-36_bunch/tools/lprof_npsu_run_1 #
########################################################################################################################################################
* Info: Detected 4 Lprof instances in node111.
If this is incorrect, rerun with number-processes-per-node=X
__ ______ _____ __ ________ _
/\ \ / / _ \| __ \ \ \ / /____ || |
/ \ \ / /| |_) | |__) | \ \ / / / /_| | _____ __
/ /\ \ \/ / | _ <| ___/ \ \/ / / / _` |/ _ \ \ / /
/ ____ \ / | |_) | | \ / / / (_| | __/\ V /
/_/ \_\/ |____/|_| \/ /_/ \__,_|\___| \_/
Using branch :
Version date : Mon, 18 Nov 2024 11:40:50 +0100
Commit : b58af1ea20
MPI processes : 4
Computation #1/1
Compilation info : mpiifort -g -O3 -fpp -traceback -fno-alias -ip -assume byterecl -convert big_endian -align -march=core-avx2 -fma -axCORE-AVX2 -I/softs/local_intel/phdf5/1.8.20/include -DHAS_PMETIS -I/softs/local_intel/parmetis/403_64/include -DPARMETIS4 -DMETIS5 -DHAS_PTSCOTCH -I/softs/local_intel/ptscotch/6.0.5a/include
Compilation wrapper info :
Compilation user : camus
Compilation date : 2025-01-13 17:18:55
Compilation MPI version : Intel(R) MPI Library for Linux* OS, Version 2021.10 Build 20230619 (id: c2e19c2f3e)
AVBP version : 7.15.0
Reading input file version : 7.15.0
----> Reading run parameters : .//run.params
----> Using NATURAL reordering
----> command.dat file API is enabled
----> Using TTGC
with UNCLOSED boundary terms
----> Using colin viscosity model
>>>>> WARNING
>>>>> No solution storage required: additional variables are deactivated!
>>>>> WARNING
>>>>> Temporals are not computed!
----> Reading mesh : .//../Mesh/Bench_simple.mesh.h5
Meshfile signature: e736f2c3c25f98227815b524d9568f9e
----> el2part file found: el2part_4.h5
Use existing partitioning
>> Reading ...took 0.078s
----> Initialize the solution writers (4 writers)
>>>>> WARNING
>>>>> No instantaneous solution storage required: the calculation of additional variables is deactivated.
Checking TFLES table parameters...
Flame thickening is applied with fthick = 17.00
----> Reading boundary conditions in asciibound file : .//../Mesh/Bench_simple.asciiBound.key
_______________________________________________________________________________________
| Boundary patches (no reordering) |
|______________________________________________________________________________________|
| Patch number Patch name Boundary condition |
| ------------ ---------- ------------------ |
| 1 INLET INLET_RELAX_UVW_T_Y |
| 2 OUTLET OUTLET_RELAX_P |
| 3 WALL WALL_NOSLIP_ADIAB |
|______________________________________________________________________________________|
______________________________________________________________
| Info on initial grid |
|_____________________________________________________________|
| number of dimensions : 3 |
| number of nodes : 514475 |
| number of cells : 2958592 |
| - tetrahedra : 2958592 |
| number of cell per group : 64 |
| number of boundary nodes : 48048 |
| number of periodic nodes : 0 |
| number of axi-periodic nodes : 0 |
|_____________________________________________________________|
| After partitioning |
|_____________________________________________________________|
| number of nodes : 526504 |
| extra nodes due to partitioning : 12029 [+ 2.34‰] |
|_____________________________________________________________|
______________________________________________________________
| Partitioning Quality |
|_____________________________________________________________|
| Maximum number of neighbors : 3.00 |
| Average number of neighbors : 2.50 |
| Maximum number of exchange nodes : 7799.00 |
| Average number of exchange nodes : 5994.25 |
|_____________________________________________________________|
----> Reading initial solution : .//../Mesh/Bench_simple.h5
----> Reading took 0.041s
______________________________________________________________
| Info on chemistry |
|_____________________________________________________________|
| Kinetic scheme : CH4-AIR-2S-CM2_FLAMMABLE |
| Validity range : 300K/1bar |
| |
| Chemical reaction #1 |
| fthick : 1.70000000E+01 |
| Preexponential / fthick [SI] : 2.00000000E+09 |
| Activation temperature [K] : 1.76130282E+04 |
| |
| Chemical reaction #2 |
| fthick : 1.70000000E+01 |
| Preexponential / fthick [SI] : 2.00000000E+06 |
| Activation temperature [K] : 6.03875251E+03 |
|_____________________________________________________________|
______________________________________________________________
| Info on initial solution |
|_____________________________________________________________|
| number of Navier-Stokes equations : 5 |
| number of species : 6 |
| number of reactions : 2 |
| number of tpf equations : 0 |
| number of fictive species : 0 |
| initial iteration : 0 |
| initial time : 0.00000000E+00 |
|_____________________________________________________________|
----> Reading solutbound : .//../Mesh/Bench_simple.solutBound.h5
- Using 6.X format
----> Reading took 0.001s
----> Initialising metrics
----> Total volume of the mesh [m3] : 1.44077204E-01
----> Smallest cell volume [m3] : 2.97811897E-11
----> Found cached wall distance computation. Checking: ./ywall.h5
> Signatures match
----> Reading cached wall distance computation: ./ywall.h5
----> Reading took 0.004s
----> Boundary MPIs: 4
----> End pre-processing.
________________________________________________________________________________________________________
----> Starts the temporal loop.
----> End computation.
________________________________________________________________________________________________________
____________________________________________________________________________________________
| 4 MPI tasks Elapsed real time [s] [s.cores] [h.cores] |
|___________________________________________________________________________________________|
| AVBP : 635.29 2.5412E+03 7.0588E-01 |
| Temporal loop : 628.49 2.5140E+03 6.9832E-01 |
| Per simulated second : 1.2718E+07 5.0871E+07 1.4131E+04 |
| Per iteration : 3.1425 1.2570E+01 |
|-------------------------------------------------------------------------------------------|
| RCT [s.mpi/node/it] : 2.44323606E-05 |
|___________________________________________________________________________________________|
----> Initial physical time : 0.00000000E+00
Initial iteration : 0
Initial timestep : 2.46481884E-07
----> Final physical time : 4.94188563E-05
Final iteration : 200
Final timestep : 2.47527782E-07
----> Simulated physical time : 4.94188563E-05
Simulated iterations : 200
________________________________________________________________________________________________________
TIMERS
________________________________________________________________________________________________________
Prints relevant timers and breaks down percentage regarding reference timers.
> The 'Total slave simulation' time corresponds to the 1st level, and is measured by slave_timer (sum of pre temporal loop, temporal loop and post temporal loop).
> The 'Computation' time corresponds to the time integration loops, and is measured by rungekutta_timer.
> Levels are depicted using [X.Y.Z. ...] lists. The number of entry in the list corresponds to the level.
> References to the upper level is made to compute the contribution of one sub-level to its parent level.
> The times displayed are those of the master processor.
> For each timer, the minimum, maximum and mean values for all processors are also shown in the 3 right-hand columns.
> A json file 'timers.json' containing all the data is also available in the temporal output directory.
----- 1st level timers
time [s] | relative to [ min [s] mean [s] max [s] ]
| tot. slave [%] [ ]
> [0] Total slave simulation : 6.3529E+02 | 100.00% [ 6.3529E+02 6.3530E+02 6.3530E+02 ]
----- 2nd level timers
time [s] | relative to [ min [s] mean [s] max [s] ]
| tot. slave [%] [ ]
> > [0.1] Pre temporal loop : 6.7950E+00 | 1.07% [ 6.7938E+00 6.7941E+00 6.7950E+00 ]
> > [0.2] Temporal loop : 6.2849E+02 | 98.93% [ 6.2849E+02 6.2849E+02 6.2849E+02 ]
> > [0.2a] Temporal loop without IO : 6.2849E+02 | 98.93% [ 6.2849E+02 6.2849E+02 6.2849E+02 ]
> > [0.3] Post temporal loop : 4.8414E-03 | 0.00% [ 4.8414E-03 9.4401E-03 1.1999E-02 ]
> > [0.4] Point to Point communications : 6.8833E+00 | 1.08% [ 6.8833E+00 3.5218E+01 7.5009E+01 ]
----- 3rd level timers
time [s] | relative to | relative to [ min [s] mean [s] max [s] ]
| tot. slave [%] | upper level [%] [ ]
> > [0.1] Pre temporal loop : 6.7950E+00 | 1.07% [ 6.7938E+00 6.7941E+00 6.7950E+00 ]
> > > [0.1.1] Build online postprocessing objects : 0.0000E+00 | 0.00% | 0.00% [ 0.0000E+00 0.0000E+00 0.0000E+00 ]
> > [0.2] Temporal loop : 6.2849E+02 | 98.93% [ 6.2849E+02 6.2849E+02 6.2849E+02 ]
> > > [0.2.1] Computation : 6.2661E+02 | 98.63% | 99.70% [ 6.2613E+02 6.2686E+02 6.2849E+02 ]
> > > [0.2.2] Temporal post-processing : 0.0000E+00 | 0.00% | 0.00% [ 0.0000E+00 0.0000E+00 0.0000E+00 ]
> > > [0.2.3] Instantaneous solution post-processing : 0.0000E+00 | 0.00% | 0.00% [ 0.0000E+00 0.0000E+00 0.0000E+00 ]
> > > [0.2.4] Average solution post-processing : 0.0000E+00 | 0.00% | 0.00% [ 0.0000E+00 0.0000E+00 0.0000E+00 ]
> > > [0.2.5] Online post-processing compute and storage : 0.0000E+00 | 0.00% | 0.00% [ 0.0000E+00 0.0000E+00 0.0000E+00 ]
----- 4th level timers: focus on Computation level (rungekutta_timer)
time [s] | relative to | relative to | relative to [ min [s] mean [s] max [s] ]
| tot. slave [%] | computation [%]| upper level [%][ ]
> > > [0.2.1] Computation : 6.2661E+02 | 98.63% | 100.00% [ 6.2613E+02 6.2686E+02 6.2849E+02 ]
> > > > [0.2.1.1] Convective scheme : 7.6577E+01 | 12.05% | 12.22% | 12.22% [ 7.3458E+01 7.5351E+01 7.6577E+01 ]
> > > > [0.2.1.2] Diffusion operator : 1.9925E+02 | 31.36% | 31.80% | 31.80% [ 1.7800E+02 1.9089E+02 2.0081E+02 ]
> > > > [0.2.1.4] Time-step calculation : 1.6501E+01 | 2.60% | 2.63% | 2.63% [ 1.6238E+01 1.6664E+01 1.7059E+01 ]
> > > > [0.2.1.5] Transport calculation : 2.3818E+00 | 0.37% | 0.38% | 0.38% [ 2.0061E+00 2.2353E+00 2.4407E+00 ]
> > > > [0.2.1.6] Thermo calculation : 3.6594E+00 | 0.58% | 0.58% | 0.58% [ 3.2198E+00 3.5025E+00 3.7656E+00 ]
> > > > [0.2.1.7] Gradient calculation : 5.7620E+01 | 9.07% | 9.20% | 9.20% [ 5.4985E+01 5.6856E+01 5.8944E+01 ]
> > > > [0.2.1.8] Boundary : 4.3352E+00 | 0.68% | 0.69% | 0.69% [ 2.9388E+00 5.1037E+00 9.9154E+00 ]
> > > > [0.2.1.9] Turbulent viscosity model : 1.2512E+01 | 1.97% | 2.00% | 2.00% [ 1.2693E+01 1.2697E+01 1.2667E+01 ]
> > > > [0.2.1.10] Combustion (source term + TFLES + efcy + efcy I0) : 5.6531E+01 | 8.90% | 9.02% | 9.02% [ 5.5936E+01 5.6431E+01 5.7069E+01 ]
> > > > > [0.2.1.10.1] Chemical source terms calculation : 4.5712E+01 | 7.20% | 7.30% | 80.86% [ 4.5467E+01 4.5701E+01 4.6010E+01 ]
> > > > > [0.2.1.10.2] TFLES model calculation : 0.0000E+00 | 0.00% | 0.00% | 0.00% [ 0.0000E+00 0.0000E+00 0.0000E+00 ]
> > > > > [0.2.1.10.3] Efficiency function calculation : 1.0818E+01 | 1.70% | 1.73% | 19.14% [ 1.0470E+01 1.0730E+01 1.1059E+01 ]
> > > > > [0.2.1.10.4] Efficiency I0 function calculation : 0.0000E+00 | 0.00% | 0.00% | 0.00% [ 0.0000E+00 0.0000E+00 0.0000E+00 ]
> > > > [0.2.1.11] Artificial viscosity : 7.0469E+01 | 11.09% | 11.25% | 11.25% [ 6.3049E+01 6.7138E+01 7.0469E+01 ]
> > > > [0.2.1.17] Source terms : 0.0000E+00 | 0.00% | 0.00% | 0.00% [ 0.0000E+00 0.0000E+00 0.0000E+00 ]
----> End of AVBP session
----> Found 3 warning messages for this computation, check your output file!
***** Memory usage (system): Max: 719.750 MB (rank:1) Min: 621.883 MB (rank:2) Ave: 669.664 MB Std: 38.692 MB
***** Maximum memory (mod_alloc) : 492612740 B ( 4.697921E+02 MB)
Info: 3/4 lprof instances finished
IPL WARN> unknown option 'bunch'
Your experiment path is /scratch/exter/camus/DATASET/SIMPLE/Run/test_avbp_200iter_m1-36_bunch/tools/lprof_npsu_run_2
To display your profiling results:
########################################################################################################################################################
# LEVEL | REPORT | COMMAND #
########################################################################################################################################################
# Functions | Cluster-wide | maqao lprof -df xp=/scratch/exter/camus/DATASET/SIMPLE/Run/test_avbp_200iter_m1-36_bunch/tools/lprof_npsu_run_2 #
# Functions | Per-node | maqao lprof -df -dn xp=/scratch/exter/camus/DATASET/SIMPLE/Run/test_avbp_200iter_m1-36_bunch/tools/lprof_npsu_run_2 #
# Functions | Per-process | maqao lprof -df -dp xp=/scratch/exter/camus/DATASET/SIMPLE/Run/test_avbp_200iter_m1-36_bunch/tools/lprof_npsu_run_2 #
# Functions | Per-thread | maqao lprof -df -dt xp=/scratch/exter/camus/DATASET/SIMPLE/Run/test_avbp_200iter_m1-36_bunch/tools/lprof_npsu_run_2 #
# Loops | Cluster-wide | maqao lprof -dl xp=/scratch/exter/camus/DATASET/SIMPLE/Run/test_avbp_200iter_m1-36_bunch/tools/lprof_npsu_run_2 #
# Loops | Per-node | maqao lprof -dl -dn xp=/scratch/exter/camus/DATASET/SIMPLE/Run/test_avbp_200iter_m1-36_bunch/tools/lprof_npsu_run_2 #
# Loops | Per-process | maqao lprof -dl -dp xp=/scratch/exter/camus/DATASET/SIMPLE/Run/test_avbp_200iter_m1-36_bunch/tools/lprof_npsu_run_2 #
# Loops | Per-thread | maqao lprof -dl -dt xp=/scratch/exter/camus/DATASET/SIMPLE/Run/test_avbp_200iter_m1-36_bunch/tools/lprof_npsu_run_2 #
########################################################################################################################################################
* Info: Detected 8 Lprof instances in node111.
If this is incorrect, rerun with number-processes-per-node=X
__ ______ _____ __ ________ _
/\ \ / / _ \| __ \ \ \ / /____ || |
/ \ \ / /| |_) | |__) | \ \ / / / /_| | _____ __
/ /\ \ \/ / | _ <| ___/ \ \/ / / / _` |/ _ \ \ / /
/ ____ \ / | |_) | | \ / / / (_| | __/\ V /
/_/ \_\/ |____/|_| \/ /_/ \__,_|\___| \_/
Using branch :
Version date : Mon, 18 Nov 2024 11:40:50 +0100
Commit : b58af1ea20
MPI processes : 8
Computation #1/1
Compilation info : mpiifort -g -O3 -fpp -traceback -fno-alias -ip -assume byterecl -convert big_endian -align -march=core-avx2 -fma -axCORE-AVX2 -I/softs/local_intel/phdf5/1.8.20/include -DHAS_PMETIS -I/softs/local_intel/parmetis/403_64/include -DPARMETIS4 -DMETIS5 -DHAS_PTSCOTCH -I/softs/local_intel/ptscotch/6.0.5a/include
Compilation wrapper info :
Compilation user : camus
Compilation date : 2025-01-13 17:18:55
Compilation MPI version : Intel(R) MPI Library for Linux* OS, Version 2021.10 Build 20230619 (id: c2e19c2f3e)
AVBP version : 7.15.0
Reading input file version : 7.15.0
----> Reading run parameters : .//run.params
----> Using NATURAL reordering
----> command.dat file API is enabled
----> Using TTGC
with UNCLOSED boundary terms
----> Using colin viscosity model
>>>>> WARNING
>>>>> No solution storage required: additional variables are deactivated!
>>>>> WARNING
>>>>> Temporals are not computed!
----> Reading mesh : .//../Mesh/Bench_simple.mesh.h5
Meshfile signature: e736f2c3c25f98227815b524d9568f9e
----> el2part file found: el2part_8.h5
Use existing partitioning
>> Reading ...took 0.063s
----> Initialize the solution writers (8 writers)
>>>>> WARNING
>>>>> No instantaneous solution storage required: the calculation of additional variables is deactivated.
Checking TFLES table parameters...
Flame thickening is applied with fthick = 17.00
----> Reading boundary conditions in asciibound file : .//../Mesh/Bench_simple.asciiBound.key
_______________________________________________________________________________________
| Boundary patches (no reordering) |
|______________________________________________________________________________________|
| Patch number Patch name Boundary condition |
| ------------ ---------- ------------------ |
| 1 INLET INLET_RELAX_UVW_T_Y |
| 2 OUTLET OUTLET_RELAX_P |
| 3 WALL WALL_NOSLIP_ADIAB |
|______________________________________________________________________________________|
______________________________________________________________
| Info on initial grid |
|_____________________________________________________________|
| number of dimensions : 3 |
| number of nodes : 514475 |
| number of cells : 2958592 |
| - tetrahedra : 2958592 |
| number of cell per group : 64 |
| number of boundary nodes : 48048 |
| number of periodic nodes : 0 |
| number of axi-periodic nodes : 0 |
|_____________________________________________________________|
| After partitioning |
|_____________________________________________________________|
| number of nodes : 533470 |
| extra nodes due to partitioning : 18995 [+ 3.69‰] |
|_____________________________________________________________|
______________________________________________________________
| Partitioning Quality |
|_____________________________________________________________|
| Maximum number of neighbors : 6.00 |
| Average number of neighbors : 4.75 |
| Maximum number of exchange nodes : 6446.00 |
| Average number of exchange nodes : 4692.12 |
|_____________________________________________________________|
----> Reading initial solution : .//../Mesh/Bench_simple.h5
----> Reading took 0.033s
______________________________________________________________
| Info on chemistry |
|_____________________________________________________________|
| Kinetic scheme : CH4-AIR-2S-CM2_FLAMMABLE |
| Validity range : 300K/1bar |
| |
| Chemical reaction #1 |
| fthick : 1.70000000E+01 |
| Preexponential / fthick [SI] : 2.00000000E+09 |
| Activation temperature [K] : 1.76130282E+04 |
| |
| Chemical reaction #2 |
| fthick : 1.70000000E+01 |
| Preexponential / fthick [SI] : 2.00000000E+06 |
| Activation temperature [K] : 6.03875251E+03 |
|_____________________________________________________________|
______________________________________________________________
| Info on initial solution |
|_____________________________________________________________|
| number of Navier-Stokes equations : 5 |
| number of species : 6 |
| number of reactions : 2 |
| number of tpf equations : 0 |
| number of fictive species : 0 |
| initial iteration : 0 |
| initial time : 0.00000000E+00 |
|_____________________________________________________________|
----> Reading solutbound : .//../Mesh/Bench_simple.solutBound.h5
- Using 6.X format
----> Reading took 0.002s
----> Initialising metrics
----> Total volume of the mesh [m3] : 1.44077204E-01
----> Smallest cell volume [m3] : 2.97811897E-11
----> Found cached wall distance computation. Checking: ./ywall.h5
> Signatures match
----> Reading cached wall distance computation: ./ywall.h5
----> Reading took 0.003s
----> Boundary MPIs: 8
----> End pre-processing.
________________________________________________________________________________________________________
----> Starts the temporal loop.
----> End computation.
________________________________________________________________________________________________________
____________________________________________________________________________________________
| 8 MPI tasks Elapsed real time [s] [s.cores] [h.cores] |
|___________________________________________________________________________________________|
| AVBP : 322.15 2.5772E+03 7.1590E-01 |
| Temporal loop : 318.91 2.5513E+03 7.0870E-01 |
| Per simulated second : 6.4533E+06 5.1626E+07 1.4341E+04 |
| Per iteration : 1.5946 1.2757E+01 |
|-------------------------------------------------------------------------------------------|
| RCT [s.mpi/node/it] : 2.47952100E-05 |
|___________________________________________________________________________________________|
----> Initial physical time : 0.00000000E+00
Initial iteration : 0
Initial timestep : 2.46481884E-07
----> Final physical time : 4.94188563E-05
Final iteration : 200
Final timestep : 2.47527782E-07
----> Simulated physical time : 4.94188563E-05
Simulated iterations : 200
________________________________________________________________________________________________________
TIMERS
________________________________________________________________________________________________________
Prints relevant timers and breaks down percentage regarding reference timers.
> The 'Total slave simulation' time corresponds to the 1st level, and is measured by slave_timer (sum of pre temporal loop, temporal loop and post temporal loop).
> The 'Computation' time corresponds to the time integration loops, and is measured by rungekutta_timer.
> Levels are depicted using [X.Y.Z. ...] lists. The number of entry in the list corresponds to the level.
> References to the upper level is made to compute the contribution of one sub-level to its parent level.
> The times displayed are those of the master processor.
> For each timer, the minimum, maximum and mean values for all processors are also shown in the 3 right-hand columns.
> A json file 'timers.json' containing all the data is also available in the temporal output directory.
----- 1st level timers
time [s] | relative to [ min [s] mean [s] max [s] ]
| tot. slave [%] [ ]
> [0] Total slave simulation : 3.2215E+02 | 100.00% [ 3.2215E+02 3.2215E+02 3.2215E+02 ]
----- 2nd level timers
time [s] | relative to [ min [s] mean [s] max [s] ]
| tot. slave [%] [ ]
> > [0.1] Pre temporal loop : 3.2290E+00 | 1.00% [ 3.2279E+00 3.2281E+00 3.2290E+00 ]
> > [0.2] Temporal loop : 3.1891E+02 | 98.99% [ 3.1891E+02 3.1891E+02 3.1891E+02 ]
> > [0.2a] Temporal loop without IO : 3.1891E+02 | 98.99% [ 3.1891E+02 3.1891E+02 3.1891E+02 ]
> > [0.3] Post temporal loop : 1.1903E-02 | 0.00% [ 9.9709E-03 1.1078E-02 1.1903E-02 ]
> > [0.4] Point to Point communications : 8.4099E+00 | 2.61% [ 3.1028E+00 1.7535E+01 4.3129E+01 ]
----- 3rd level timers
time [s] | relative to | relative to [ min [s] mean [s] max [s] ]
| tot. slave [%] | upper level [%] [ ]
> > [0.1] Pre temporal loop : 3.2290E+00 | 1.00% [ 3.2279E+00 3.2281E+00 3.2290E+00 ]
> > > [0.1.1] Build online postprocessing objects : 0.0000E+00 | 0.00% | 0.00% [ 0.0000E+00 0.0000E+00 0.0000E+00 ]
> > [0.2] Temporal loop : 3.1891E+02 | 98.99% [ 3.1891E+02 3.1891E+02 3.1891E+02 ]
> > > [0.2.1] Computation : 3.1776E+02 | 98.64% | 99.64% [ 3.1771E+02 3.1803E+02 3.1890E+02 ]
> > > [0.2.2] Temporal post-processing : 0.0000E+00 | 0.00% | 0.00% [ 0.0000E+00 0.0000E+00 0.0000E+00 ]
> > > [0.2.3] Instantaneous solution post-processing : 0.0000E+00 | 0.00% | 0.00% [ 0.0000E+00 0.0000E+00 0.0000E+00 ]
> > > [0.2.4] Average solution post-processing : 0.0000E+00 | 0.00% | 0.00% [ 0.0000E+00 0.0000E+00 0.0000E+00 ]
> > > [0.2.5] Online post-processing compute and storage : 0.0000E+00 | 0.00% | 0.00% [ 0.0000E+00 0.0000E+00 0.0000E+00 ]
----- 4th level timers: focus on Computation level (rungekutta_timer)
time [s] | relative to | relative to | relative to [ min [s] mean [s] max [s] ]
| tot. slave [%] | computation [%]| upper level [%][ ]
> > > [0.2.1] Computation : 3.1776E+02 | 98.64% | 100.00% [ 3.1771E+02 3.1803E+02 3.1890E+02 ]
> > > > [0.2.1.1] Convective scheme : 3.8489E+01 | 11.95% | 12.11% | 12.11% [ 3.7019E+01 3.8166E+01 3.9343E+01 ]
> > > > [0.2.1.2] Diffusion operator : 9.8532E+01 | 30.59% | 31.01% | 31.01% [ 8.8002E+01 9.5838E+01 9.9744E+01 ]
> > > > [0.2.1.4] Time-step calculation : 7.8570E+00 | 2.44% | 2.47% | 2.47% [ 7.7768E+00 7.9130E+00 8.1779E+00 ]
> > > > [0.2.1.5] Transport calculation : 1.4946E+00 | 0.46% | 0.47% | 0.47% [ 1.2394E+00 1.3936E+00 1.5083E+00 ]
> > > > [0.2.1.6] Thermo calculation : 2.0399E+00 | 0.63% | 0.64% | 0.64% [ 1.7675E+00 1.9508E+00 2.0444E+00 ]
> > > > [0.2.1.7] Gradient calculation : 2.8470E+01 | 8.84% | 8.96% | 8.96% [ 2.8059E+01 2.8536E+01 2.9352E+01 ]
> > > > [0.2.1.8] Boundary : 1.8605E+00 | 0.58% | 0.59% | 0.59% [ 1.8493E+00 2.9127E+00 5.8499E+00 ]
> > > > [0.2.1.9] Turbulent viscosity model : 6.2976E+00 | 1.95% | 1.98% | 1.98% [ 6.3996E+00 6.3779E+00 6.4449E+00 ]
> > > > [0.2.1.10] Combustion (source term + TFLES + efcy + efcy I0) : 2.8314E+01 | 8.79% | 8.91% | 8.91% [ 2.7604E+01 2.8199E+01 2.8526E+01 ]
> > > > > [0.2.1.10.1] Chemical source terms calculation : 2.2880E+01 | 7.10% | 7.20% | 80.81% [ 2.2337E+01 2.2777E+01 2.2935E+01 ]
> > > > > [0.2.1.10.2] TFLES model calculation : 0.0000E+00 | 0.00% | 0.00% | 0.00% [ 0.0000E+00 0.0000E+00 0.0000E+00 ]
> > > > > [0.2.1.10.3] Efficiency function calculation : 5.4339E+00 | 1.69% | 1.71% | 19.19% [ 5.2669E+00 5.4229E+00 5.5909E+00 ]
> > > > > [0.2.1.10.4] Efficiency I0 function calculation : 0.0000E+00 | 0.00% | 0.00% | 0.00% [ 0.0000E+00 0.0000E+00 0.0000E+00 ]
> > > > [0.2.1.11] Artificial viscosity : 3.5311E+01 | 10.96% | 11.11% | 11.11% [ 3.1028E+01 3.4077E+01 3.5695E+01 ]
> > > > [0.2.1.17] Source terms : 0.0000E+00 | 0.00% | 0.00% | 0.00% [ 0.0000E+00 0.0000E+00 0.0000E+00 ]
----> End of AVBP session
----> Found 3 warning messages for this computation, check your output file!
***** Memory usage (system): Max: 459.973 MB (rank:1) Min: 409.727 MB (rank:6) Ave: 441.944 MB Std: 15.767 MB
***** Maximum memory (mod_alloc) : 243626740 B ( 2.323406E+02 MB)
Info: 7/8 lprof instances finished
IPL WARN> unknown option 'bunch'
Info: Detected stop signals that could make lprof alter execution. In case of issues, rerun with lprof-params="-verbose" for more information.
Your experiment path is /scratch/exter/camus/DATASET/SIMPLE/Run/test_avbp_200iter_m1-36_bunch/tools/lprof_npsu_run_3
To display your profiling results:
########################################################################################################################################################
# LEVEL | REPORT | COMMAND #
########################################################################################################################################################
# Functions | Cluster-wide | maqao lprof -df xp=/scratch/exter/camus/DATASET/SIMPLE/Run/test_avbp_200iter_m1-36_bunch/tools/lprof_npsu_run_3 #
# Functions | Per-node | maqao lprof -df -dn xp=/scratch/exter/camus/DATASET/SIMPLE/Run/test_avbp_200iter_m1-36_bunch/tools/lprof_npsu_run_3 #
# Functions | Per-process | maqao lprof -df -dp xp=/scratch/exter/camus/DATASET/SIMPLE/Run/test_avbp_200iter_m1-36_bunch/tools/lprof_npsu_run_3 #
# Functions | Per-thread | maqao lprof -df -dt xp=/scratch/exter/camus/DATASET/SIMPLE/Run/test_avbp_200iter_m1-36_bunch/tools/lprof_npsu_run_3 #
# Loops | Cluster-wide | maqao lprof -dl xp=/scratch/exter/camus/DATASET/SIMPLE/Run/test_avbp_200iter_m1-36_bunch/tools/lprof_npsu_run_3 #
# Loops | Per-node | maqao lprof -dl -dn xp=/scratch/exter/camus/DATASET/SIMPLE/Run/test_avbp_200iter_m1-36_bunch/tools/lprof_npsu_run_3 #
# Loops | Per-process | maqao lprof -dl -dp xp=/scratch/exter/camus/DATASET/SIMPLE/Run/test_avbp_200iter_m1-36_bunch/tools/lprof_npsu_run_3 #
# Loops | Per-thread | maqao lprof -dl -dt xp=/scratch/exter/camus/DATASET/SIMPLE/Run/test_avbp_200iter_m1-36_bunch/tools/lprof_npsu_run_3 #
########################################################################################################################################################
* Info: Detected 16 Lprof instances in node111.
If this is incorrect, rerun with number-processes-per-node=X
__ ______ _____ __ ________ _
/\ \ / / _ \| __ \ \ \ / /____ || |
/ \ \ / /| |_) | |__) | \ \ / / / /_| | _____ __
/ /\ \ \/ / | _ <| ___/ \ \/ / / / _` |/ _ \ \ / /
/ ____ \ / | |_) | | \ / / / (_| | __/\ V /
/_/ \_\/ |____/|_| \/ /_/ \__,_|\___| \_/
Using branch :
Version date : Mon, 18 Nov 2024 11:40:50 +0100
Commit : b58af1ea20
MPI processes : 16
Computation #1/1
Compilation info : mpiifort -g -O3 -fpp -traceback -fno-alias -ip -assume byterecl -convert big_endian -align -march=core-avx2 -fma -axCORE-AVX2 -I/softs/local_intel/phdf5/1.8.20/include -DHAS_PMETIS -I/softs/local_intel/parmetis/403_64/include -DPARMETIS4 -DMETIS5 -DHAS_PTSCOTCH -I/softs/local_intel/ptscotch/6.0.5a/include
Compilation wrapper info :
Compilation user : camus
Compilation date : 2025-01-13 17:18:55
Compilation MPI version : Intel(R) MPI Library for Linux* OS, Version 2021.10 Build 20230619 (id: c2e19c2f3e)
AVBP version : 7.15.0
Reading input file version : 7.15.0
----> Reading run parameters : .//run.params
----> Using NATURAL reordering
----> command.dat file API is enabled
----> Using TTGC
with UNCLOSED boundary terms
----> Using colin viscosity model
>>>>> WARNING
>>>>> No solution storage required: additional variables are deactivated!
>>>>> WARNING
>>>>> Temporals are not computed!
----> Reading mesh : .//../Mesh/Bench_simple.mesh.h5
Meshfile signature: e736f2c3c25f98227815b524d9568f9e
----> el2part file found: el2part_16.h5
Use existing partitioning
>> Reading ...took 0.043s
----> Initialize the solution writers (16 writers)
>>>>> WARNING
>>>>> No instantaneous solution storage required: the calculation of additional variables is deactivated.
Checking TFLES table parameters...
Flame thickening is applied with fthick = 17.00
----> Reading boundary conditions in asciibound file : .//../Mesh/Bench_simple.asciiBound.key
_______________________________________________________________________________________
| Boundary patches (no reordering) |
|______________________________________________________________________________________|
| Patch number Patch name Boundary condition |
| ------------ ---------- ------------------ |
| 1 INLET INLET_RELAX_UVW_T_Y |
| 2 OUTLET OUTLET_RELAX_P |
| 3 WALL WALL_NOSLIP_ADIAB |
|______________________________________________________________________________________|
______________________________________________________________
| Info on initial grid |
|_____________________________________________________________|
| number of dimensions : 3 |
| number of nodes : 514475 |
| number of cells : 2958592 |
| - tetrahedra : 2958592 |
| number of cell per group : 64 |
| number of boundary nodes : 48048 |
| number of periodic nodes : 0 |
| number of axi-periodic nodes : 0 |
|_____________________________________________________________|
| After partitioning |
|_____________________________________________________________|
| number of nodes : 543415 |
| extra nodes due to partitioning : 28940 [+ 5.63‰] |
|_____________________________________________________________|
______________________________________________________________
| Partitioning Quality |
|_____________________________________________________________|
| Maximum number of neighbors : 10.00 |
| Average number of neighbors : 6.38 |
| Maximum number of exchange nodes : 6369.00 |
| Average number of exchange nodes : 3557.25 |
|_____________________________________________________________|
----> Reading initial solution : .//../Mesh/Bench_simple.h5
----> Reading took 0.029s
______________________________________________________________
| Info on chemistry |
|_____________________________________________________________|
| Kinetic scheme : CH4-AIR-2S-CM2_FLAMMABLE |
| Validity range : 300K/1bar |
| |
| Chemical reaction #1 |
| fthick : 1.70000000E+01 |
| Preexponential / fthick [SI] : 2.00000000E+09 |
| Activation temperature [K] : 1.76130282E+04 |
| |
| Chemical reaction #2 |
| fthick : 1.70000000E+01 |
| Preexponential / fthick [SI] : 2.00000000E+06 |
| Activation temperature [K] : 6.03875251E+03 |
|_____________________________________________________________|
______________________________________________________________
| Info on initial solution |
|_____________________________________________________________|
| number of Navier-Stokes equations : 5 |
| number of species : 6 |
| number of reactions : 2 |
| number of tpf equations : 0 |
| number of fictive species : 0 |
| initial iteration : 0 |
| initial time : 0.00000000E+00 |
|_____________________________________________________________|
----> Reading solutbound : .//../Mesh/Bench_simple.solutBound.h5
- Using 6.X format
----> Reading took 0.002s
----> Initialising metrics
----> Total volume of the mesh [m3] : 1.44077204E-01
----> Smallest cell volume [m3] : 2.97811897E-11
----> Found cached wall distance computation. Checking: ./ywall.h5
> Signatures match
----> Reading cached wall distance computation: ./ywall.h5
----> Reading took 0.003s
----> Boundary MPIs: 16
----> End pre-processing.
________________________________________________________________________________________________________
----> Starts the temporal loop.
----> End computation.
________________________________________________________________________________________________________
____________________________________________________________________________________________
| 16 MPI tasks Elapsed real time [s] [s.cores] [h.cores] |
|___________________________________________________________________________________________|
| AVBP : 170.66 2.7306E+03 7.5849E-01 |
| Temporal loop : 168.69 2.6990E+03 7.4973E-01 |
| Per simulated second : 3.4135E+06 5.4615E+07 1.5171E+04 |
| Per iteration : 0.8434 1.3495E+01 |
|-------------------------------------------------------------------------------------------|
| RCT [s.mpi/node/it] : 2.62309615E-05 |
|___________________________________________________________________________________________|
----> Initial physical time : 0.00000000E+00
Initial iteration : 0
Initial timestep : 2.46481884E-07
----> Final physical time : 4.94188563E-05
Final iteration : 200
Final timestep : 2.47527782E-07
----> Simulated physical time : 4.94188563E-05
Simulated iterations : 200
________________________________________________________________________________________________________
TIMERS
________________________________________________________________________________________________________
Prints relevant timers and breaks down percentage regarding reference timers.
> The 'Total slave simulation' time corresponds to the 1st level, and is measured by slave_timer (sum of pre temporal loop, temporal loop and post temporal loop).
> The 'Computation' time corresponds to the time integration loops, and is measured by rungekutta_timer.
> Levels are depicted using [X.Y.Z. ...] lists. The number of entry in the list corresponds to the level.
> References to the upper level is made to compute the contribution of one sub-level to its parent level.
> The times displayed are those of the master processor.
> For each timer, the minimum, maximum and mean values for all processors are also shown in the 3 right-hand columns.
> A json file 'timers.json' containing all the data is also available in the temporal output directory.
----- 1st level timers
time [s] | relative to [ min [s] mean [s] max [s] ]
| tot. slave [%] [ ]
> [0] Total slave simulation : 1.7066E+02 | 100.00% [ 1.7066E+02 1.7066E+02 1.7066E+02 ]
----- 2nd level timers
time [s] | relative to [ min [s] mean [s] max [s] ]
| tot. slave [%] [ ]
> > [0.1] Pre temporal loop : 1.9615E+00 | 1.15% [ 1.9604E+00 1.9606E+00 1.9615E+00 ]
> > [0.2] Temporal loop : 1.6869E+02 | 98.85% [ 1.6869E+02 1.6869E+02 1.6869E+02 ]
> > [0.2a] Temporal loop without IO : 1.6869E+02 | 98.85% [ 1.6869E+02 1.6869E+02 1.6869E+02 ]
> > [0.3] Post temporal loop : 8.5762E-03 | 0.01% [ 4.1058E-03 7.3537E-03 8.5762E-03 ]
> > [0.4] Point to Point communications : 5.7205E+00 | 3.35% [ 3.3585E+00 1.3429E+01 4.9351E+01 ]
----- 3rd level timers
time [s] | relative to | relative to [ min [s] mean [s] max [s] ]
| tot. slave [%] | upper level [%] [ ]
> > [0.1] Pre temporal loop : 1.9615E+00 | 1.15% [ 1.9604E+00 1.9606E+00 1.9615E+00 ]
> > > [0.1.1] Build online postprocessing objects : 0.0000E+00 | 0.00% | 0.00% [ 0.0000E+00 0.0000E+00 0.0000E+00 ]
> > [0.2] Temporal loop : 1.6869E+02 | 98.85% [ 1.6869E+02 1.6869E+02 1.6869E+02 ]
> > > [0.2.1] Computation : 1.6826E+02 | 98.60% | 99.75% [ 1.6778E+02 1.6810E+02 1.6867E+02 ]
> > > [0.2.2] Temporal post-processing : 0.0000E+00 | 0.00% | 0.00% [ 0.0000E+00 0.0000E+00 0.0000E+00 ]
> > > [0.2.3] Instantaneous solution post-processing : 0.0000E+00 | 0.00% | 0.00% [ 0.0000E+00 0.0000E+00 0.0000E+00 ]
> > > [0.2.4] Average solution post-processing : 0.0000E+00 | 0.00% | 0.00% [ 0.0000E+00 0.0000E+00 0.0000E+00 ]
> > > [0.2.5] Online post-processing compute and storage : 0.0000E+00 | 0.00% | 0.00% [ 0.0000E+00 0.0000E+00 0.0000E+00 ]
----- 4th level timers: focus on Computation level (rungekutta_timer)
time [s] | relative to | relative to | relative to [ min [s] mean [s] max [s] ]
| tot. slave [%] | computation [%]| upper level [%][ ]
> > > [0.2.1] Computation : 1.6826E+02 | 98.60% | 100.00% [ 1.6778E+02 1.6810E+02 1.6867E+02 ]
> > > > [0.2.1.1] Convective scheme : 2.0691E+01 | 12.12% | 12.30% | 12.30% [ 1.8688E+01 2.0430E+01 2.2534E+01 ]
> > > > [0.2.1.2] Diffusion operator : 5.0279E+01 | 29.46% | 29.88% | 29.88% [ 3.6967E+01 4.8014E+01 5.0196E+01 ]
> > > > [0.2.1.4] Time-step calculation : 3.7687E+00 | 2.21% | 2.24% | 2.24% [ 3.6772E+00 3.7945E+00 4.3619E+00 ]
> > > > [0.2.1.5] Transport calculation : 1.0630E+00 | 0.62% | 0.63% | 0.63% [ 5.2120E-01 1.0241E+00 1.0870E+00 ]
> > > > [0.2.1.6] Thermo calculation : 1.3467E+00 | 0.79% | 0.80% | 0.80% [ 1.0026E+00 1.4061E+00 1.5383E+00 ]
> > > > [0.2.1.7] Gradient calculation : 1.6421E+01 | 9.62% | 9.76% | 9.76% [ 1.4574E+01 1.6130E+01 1.7192E+01 ]
> > > > [0.2.1.8] Boundary : 3.1420E+00 | 1.84% | 1.87% | 1.87% [ 7.3265E-01 1.9548E+00 4.3246E+00 ]
> > > > [0.2.1.9] Turbulent viscosity model : 3.3777E+00 | 1.98% | 2.01% | 2.01% [ 3.3785E+00 3.4112E+00 3.7936E+00 ]
> > > > [0.2.1.10] Combustion (source term + TFLES + efcy + efcy I0) : 1.4703E+01 | 8.62% | 8.74% | 8.74% [ 1.4376E+01 1.5194E+01 1.6822E+01 ]
> > > > > [0.2.1.10.1] Chemical source terms calculation : 1.1580E+01 | 6.79% | 6.88% | 78.76% [ 1.1461E+01 1.2048E+01 1.3413E+01 ]
> > > > > [0.2.1.10.2] TFLES model calculation : 0.0000E+00 | 0.00% | 0.00% | 0.00% [ 0.0000E+00 0.0000E+00 0.0000E+00 ]
> > > > > [0.2.1.10.3] Efficiency function calculation : 3.1230E+00 | 1.83% | 1.86% | 21.24% [ 2.9153E+00 3.1455E+00 3.4088E+00 ]
> > > > > [0.2.1.10.4] Efficiency I0 function calculation : 0.0000E+00 | 0.00% | 0.00% | 0.00% [ 0.0000E+00 0.0000E+00 0.0000E+00 ]
> > > > [0.2.1.11] Artificial viscosity : 1.7754E+01 | 10.40% | 10.55% | 10.55% [ 1.3158E+01 1.7038E+01 1.8302E+01 ]
> > > > [0.2.1.17] Source terms : 0.0000E+00 | 0.00% | 0.00% | 0.00% [ 0.0000E+00 0.0000E+00 0.0000E+00 ]
----> End of AVBP session
----> Found 3 warning messages for this computation, check your output file!
***** Memory usage (system): Max: 357.637 MB (rank:10) Min: 273.789 MB (rank:13) Ave: 326.895 MB Std: 20.461 MB
***** Maximum memory (mod_alloc) : 130183148 B ( 1.241523E+02 MB)
Info: 15/16 lprof instances finished
IPL WARN> unknown option 'bunch'
Info: Detected stop signals that could make lprof alter execution. In case of issues, rerun with lprof-params="-verbose" for more information.
Your experiment path is /scratch/exter/camus/DATASET/SIMPLE/Run/test_avbp_200iter_m1-36_bunch/tools/lprof_npsu_run_4
To display your profiling results:
########################################################################################################################################################
# LEVEL | REPORT | COMMAND #
########################################################################################################################################################
# Functions | Cluster-wide | maqao lprof -df xp=/scratch/exter/camus/DATASET/SIMPLE/Run/test_avbp_200iter_m1-36_bunch/tools/lprof_npsu_run_4 #
# Functions | Per-node | maqao lprof -df -dn xp=/scratch/exter/camus/DATASET/SIMPLE/Run/test_avbp_200iter_m1-36_bunch/tools/lprof_npsu_run_4 #
# Functions | Per-process | maqao lprof -df -dp xp=/scratch/exter/camus/DATASET/SIMPLE/Run/test_avbp_200iter_m1-36_bunch/tools/lprof_npsu_run_4 #
# Functions | Per-thread | maqao lprof -df -dt xp=/scratch/exter/camus/DATASET/SIMPLE/Run/test_avbp_200iter_m1-36_bunch/tools/lprof_npsu_run_4 #
# Loops | Cluster-wide | maqao lprof -dl xp=/scratch/exter/camus/DATASET/SIMPLE/Run/test_avbp_200iter_m1-36_bunch/tools/lprof_npsu_run_4 #
# Loops | Per-node | maqao lprof -dl -dn xp=/scratch/exter/camus/DATASET/SIMPLE/Run/test_avbp_200iter_m1-36_bunch/tools/lprof_npsu_run_4 #
# Loops | Per-process | maqao lprof -dl -dp xp=/scratch/exter/camus/DATASET/SIMPLE/Run/test_avbp_200iter_m1-36_bunch/tools/lprof_npsu_run_4 #
# Loops | Per-thread | maqao lprof -dl -dt xp=/scratch/exter/camus/DATASET/SIMPLE/Run/test_avbp_200iter_m1-36_bunch/tools/lprof_npsu_run_4 #
########################################################################################################################################################
* Info: Detected 18 Lprof instances in node111.
If this is incorrect, rerun with number-processes-per-node=X
__ ______ _____ __ ________ _
/\ \ / / _ \| __ \ \ \ / /____ || |
/ \ \ / /| |_) | |__) | \ \ / / / /_| | _____ __
/ /\ \ \/ / | _ <| ___/ \ \/ / / / _` |/ _ \ \ / /
/ ____ \ / | |_) | | \ / / / (_| | __/\ V /
/_/ \_\/ |____/|_| \/ /_/ \__,_|\___| \_/
Using branch :
Version date : Mon, 18 Nov 2024 11:40:50 +0100
Commit : b58af1ea20
MPI processes : 18
Computation #1/1
Compilation info : mpiifort -g -O3 -fpp -traceback -fno-alias -ip -assume byterecl -convert big_endian -align -march=core-avx2 -fma -axCORE-AVX2 -I/softs/local_intel/phdf5/1.8.20/include -DHAS_PMETIS -I/softs/local_intel/parmetis/403_64/include -DPARMETIS4 -DMETIS5 -DHAS_PTSCOTCH -I/softs/local_intel/ptscotch/6.0.5a/include
Compilation wrapper info :
Compilation user : camus
Compilation date : 2025-01-13 17:18:55
Compilation MPI version : Intel(R) MPI Library for Linux* OS, Version 2021.10 Build 20230619 (id: c2e19c2f3e)
AVBP version : 7.15.0
Reading input file version : 7.15.0
----> Reading run parameters : .//run.params
----> Using NATURAL reordering
----> command.dat file API is enabled
----> Using TTGC
with UNCLOSED boundary terms
----> Using colin viscosity model
>>>>> WARNING
>>>>> No solution storage required: additional variables are deactivated!
>>>>> WARNING
>>>>> Temporals are not computed!
----> Reading mesh : .//../Mesh/Bench_simple.mesh.h5
Meshfile signature: e736f2c3c25f98227815b524d9568f9e
----> el2part file found: el2part_18.h5
Use existing partitioning
>> Reading ...took 0.041s
----> Initialize the solution writers (18 writers)
>>>>> WARNING
>>>>> No instantaneous solution storage required: the calculation of additional variables is deactivated.
Checking TFLES table parameters...
Flame thickening is applied with fthick = 17.00
----> Reading boundary conditions in asciibound file : .//../Mesh/Bench_simple.asciiBound.key
_______________________________________________________________________________________
| Boundary patches (no reordering) |
|______________________________________________________________________________________|
| Patch number Patch name Boundary condition |
| ------------ ---------- ------------------ |
| 1 INLET INLET_RELAX_UVW_T_Y |
| 2 OUTLET OUTLET_RELAX_P |
| 3 WALL WALL_NOSLIP_ADIAB |
|______________________________________________________________________________________|
______________________________________________________________
| Info on initial grid |
|_____________________________________________________________|
| number of dimensions : 3 |
| number of nodes : 514475 |
| number of cells : 2958592 |
| - tetrahedra : 2958592 |
| number of cell per group : 64 |
| number of boundary nodes : 48048 |
| number of periodic nodes : 0 |
| number of axi-periodic nodes : 0 |
|_____________________________________________________________|
| After partitioning |
|_____________________________________________________________|
| number of nodes : 547578 |
| extra nodes due to partitioning : 33103 [+ 6.43‰] |
|_____________________________________________________________|
______________________________________________________________
| Partitioning Quality |
|_____________________________________________________________|
| Maximum number of neighbors : 10.00 |
| Average number of neighbors : 6.33 |
| Maximum number of exchange nodes : 5699.00 |
| Average number of exchange nodes : 3615.56 |
|_____________________________________________________________|
----> Reading initial solution : .//../Mesh/Bench_simple.h5
----> Reading took 0.032s
______________________________________________________________
| Info on chemistry |
|_____________________________________________________________|
| Kinetic scheme : CH4-AIR-2S-CM2_FLAMMABLE |
| Validity range : 300K/1bar |
| |
| Chemical reaction #1 |
| fthick : 1.70000000E+01 |
| Preexponential / fthick [SI] : 2.00000000E+09 |
| Activation temperature [K] : 1.76130282E+04 |
| |
| Chemical reaction #2 |
| fthick : 1.70000000E+01 |
| Preexponential / fthick [SI] : 2.00000000E+06 |
| Activation temperature [K] : 6.03875251E+03 |
|_____________________________________________________________|
______________________________________________________________
| Info on initial solution |
|_____________________________________________________________|
| number of Navier-Stokes equations : 5 |
| number of species : 6 |
| number of reactions : 2 |
| number of tpf equations : 0 |
| number of fictive species : 0 |
| initial iteration : 0 |
| initial time : 0.00000000E+00 |
|_____________________________________________________________|
----> Reading solutbound : .//../Mesh/Bench_simple.solutBound.h5
- Using 6.X format
----> Reading took 0.002s
----> Initialising metrics
----> Total volume of the mesh [m3] : 1.44077204E-01
----> Smallest cell volume [m3] : 2.97811897E-11
----> Found cached wall distance computation. Checking: ./ywall.h5
> Signatures match
----> Reading cached wall distance computation: ./ywall.h5
----> Reading took 0.003s
----> Boundary MPIs: 18
----> End pre-processing.
________________________________________________________________________________________________________
----> Starts the temporal loop.
----> End computation.
________________________________________________________________________________________________________
____________________________________________________________________________________________
| 18 MPI tasks Elapsed real time [s] [s.cores] [h.cores] |
|___________________________________________________________________________________________|
| AVBP : 154.79 2.7863E+03 7.7397E-01 |
| Temporal loop : 152.97 2.7535E+03 7.6486E-01 |
| Per simulated second : 3.0954E+06 5.5717E+07 1.5477E+04 |
| Per iteration : 0.7649 1.3767E+01 |
|-------------------------------------------------------------------------------------------|
| RCT [s.mpi/node/it] : 2.67602122E-05 |
|___________________________________________________________________________________________|
----> Initial physical time : 0.00000000E+00
Initial iteration : 0
Initial timestep : 2.46481884E-07
----> Final physical time : 4.94188563E-05
Final iteration : 200
Final timestep : 2.47527782E-07
----> Simulated physical time : 4.94188563E-05
Simulated iterations : 200
________________________________________________________________________________________________________
TIMERS
________________________________________________________________________________________________________
Prints relevant timers and breaks down percentage regarding reference timers.
> The 'Total slave simulation' time corresponds to the 1st level, and is measured by slave_timer (sum of pre temporal loop, temporal loop and post temporal loop).
> The 'Computation' time corresponds to the time integration loops, and is measured by rungekutta_timer.
> Levels are depicted using [X.Y.Z. ...] lists. The number of entry in the list corresponds to the level.
> References to the upper level is made to compute the contribution of one sub-level to its parent level.
> The times displayed are those of the master processor.
> For each timer, the minimum, maximum and mean values for all processors are also shown in the 3 right-hand columns.
> A json file 'timers.json' containing all the data is also available in the temporal output directory.
----- 1st level timers
time [s] | relative to [ min [s] mean [s] max [s] ]
| tot. slave [%] [ ]
> [0] Total slave simulation : 1.5479E+02 | 100.00% [ 1.5479E+02 1.5479E+02 1.5479E+02 ]
----- 2nd level timers
time [s] | relative to [ min [s] mean [s] max [s] ]
| tot. slave [%] [ ]
> > [0.1] Pre temporal loop : 1.8145E+00 | 1.17% [ 1.8133E+00 1.8135E+00 1.8145E+00 ]
> > [0.2] Temporal loop : 1.5297E+02 | 98.82% [ 1.5297E+02 1.5297E+02 1.5297E+02 ]
> > [0.2a] Temporal loop without IO : 1.5297E+02 | 98.82% [ 1.5297E+02 1.5297E+02 1.5297E+02 ]
> > [0.3] Post temporal loop : 6.8530E-03 | 0.00% [ 4.5851E-03 6.7258E-03 7.7824E-03 ]
> > [0.4] Point to Point communications : 3.8232E+00 | 2.47% [ 2.0647E+00 1.0956E+01 2.7848E+01 ]
----- 3rd level timers
time [s] | relative to | relative to [ min [s] mean [s] max [s] ]
| tot. slave [%] | upper level [%] [ ]
> > [0.1] Pre temporal loop : 1.8145E+00 | 1.17% [ 1.8133E+00 1.8135E+00 1.8145E+00 ]
> > > [0.1.1] Build online postprocessing objects : 0.0000E+00 | 0.00% | 0.00% [ 0.0000E+00 0.0000E+00 0.0000E+00 ]
> > [0.2] Temporal loop : 1.5297E+02 | 98.82% [ 1.5297E+02 1.5297E+02 1.5297E+02 ]
> > > [0.2.1] Computation : 1.5249E+02 | 98.51% | 99.69% [ 1.5207E+02 1.5235E+02 1.5296E+02 ]
> > > [0.2.2] Temporal post-processing : 0.0000E+00 | 0.00% | 0.00% [ 0.0000E+00 0.0000E+00 0.0000E+00 ]
> > > [0.2.3] Instantaneous solution post-processing : 0.0000E+00 | 0.00% | 0.00% [ 0.0000E+00 0.0000E+00 0.0000E+00 ]
> > > [0.2.4] Average solution post-processing : 0.0000E+00 | 0.00% | 0.00% [ 0.0000E+00 0.0000E+00 0.0000E+00 ]
> > > [0.2.5] Online post-processing compute and storage : 0.0000E+00 | 0.00% | 0.00% [ 0.0000E+00 0.0000E+00 0.0000E+00 ]
----- 4th level timers: focus on Computation level (rungekutta_timer)
time [s] | relative to | relative to | relative to [ min [s] mean [s] max [s] ]
| tot. slave [%] | computation [%]| upper level [%][ ]
> > > [0.2.1] Computation : 1.5249E+02 | 98.51% | 100.00% [ 1.5207E+02 1.5235E+02 1.5296E+02 ]
> > > > [0.2.1.1] Convective scheme : 1.7531E+01 | 11.33% | 11.50% | 11.50% [ 1.6162E+01 1.8476E+01 1.9973E+01 ]
> > > > [0.2.1.2] Diffusion operator : 4.5071E+01 | 29.12% | 29.56% | 29.56% [ 3.8631E+01 4.3033E+01 4.5239E+01 ]
> > > > [0.2.1.4] Time-step calculation : 3.4392E+00 | 2.22% | 2.26% | 2.26% [ 3.3104E+00 3.3927E+00 3.6214E+00 ]
> > > > [0.2.1.5] Transport calculation : 9.9085E-01 | 0.64% | 0.65% | 0.65% [ 8.5192E-01 1.0530E+00 1.2145E+00 ]
> > > > [0.2.1.6] Thermo calculation : 1.3942E+00 | 0.90% | 0.91% | 0.91% [ 1.2178E+00 1.4166E+00 1.5292E+00 ]
> > > > [0.2.1.7] Gradient calculation : 1.5252E+01 | 9.85% | 10.00% | 10.00% [ 1.3696E+01 1.4839E+01 1.6310E+01 ]
> > > > [0.2.1.8] Boundary : 3.7573E+00 | 2.43% | 2.46% | 2.46% [ 7.5598E-01 1.9604E+00 4.3501E+00 ]
> > > > [0.2.1.9] Turbulent viscosity model : 2.9791E+00 | 1.92% | 1.95% | 1.95% [ 3.0398E+00 3.1478E+00 3.1168E+00 ]
> > > > [0.2.1.10] Combustion (source term + TFLES + efcy + efcy I0) : 1.3866E+01 | 8.96% | 9.09% | 9.09% [ 1.3554E+01 1.4045E+01 1.4979E+01 ]
> > > > > [0.2.1.10.1] Chemical source terms calculation : 1.0738E+01 | 6.94% | 7.04% | 77.44% [ 1.0623E+01 1.1016E+01 1.1607E+01 ]
> > > > > [0.2.1.10.2] TFLES model calculation : 0.0000E+00 | 0.00% | 0.00% | 0.00% [ 0.0000E+00 0.0000E+00 0.0000E+00 ]
> > > > > [0.2.1.10.3] Efficiency function calculation : 3.1280E+00 | 2.02% | 2.05% | 22.56% [ 2.9305E+00 3.0289E+00 3.3728E+00 ]
> > > > > [0.2.1.10.4] Efficiency I0 function calculation : 0.0000E+00 | 0.00% | 0.00% | 0.00% [ 0.0000E+00 0.0000E+00 0.0000E+00 ]
> > > > [0.2.1.11] Artificial viscosity : 1.5881E+01 | 10.26% | 10.41% | 10.41% [ 1.3524E+01 1.5315E+01 1.6401E+01 ]
> > > > [0.2.1.17] Source terms : 0.0000E+00 | 0.00% | 0.00% | 0.00% [ 0.0000E+00 0.0000E+00 0.0000E+00 ]
----> End of AVBP session
----> Found 3 warning messages for this computation, check your output file!
***** Memory usage (system): Max: 343.113 MB (rank:0) Min: 305.566 MB (rank:12) Ave: 330.516 MB Std: 12.279 MB
***** Maximum memory (mod_alloc) : 116774544 B ( 1.113649E+02 MB)
Info: 17/18 lprof instances finished
IPL WARN> unknown option 'bunch'
Info: Detected stop signals that could make lprof alter execution. In case of issues, rerun with lprof-params="-verbose" for more information.
Your experiment path is /scratch/exter/camus/DATASET/SIMPLE/Run/test_avbp_200iter_m1-36_bunch/tools/lprof_npsu_run_5
To display your profiling results:
########################################################################################################################################################
# LEVEL | REPORT | COMMAND #
########################################################################################################################################################
# Functions | Cluster-wide | maqao lprof -df xp=/scratch/exter/camus/DATASET/SIMPLE/Run/test_avbp_200iter_m1-36_bunch/tools/lprof_npsu_run_5 #
# Functions | Per-node | maqao lprof -df -dn xp=/scratch/exter/camus/DATASET/SIMPLE/Run/test_avbp_200iter_m1-36_bunch/tools/lprof_npsu_run_5 #
# Functions | Per-process | maqao lprof -df -dp xp=/scratch/exter/camus/DATASET/SIMPLE/Run/test_avbp_200iter_m1-36_bunch/tools/lprof_npsu_run_5 #
# Functions | Per-thread | maqao lprof -df -dt xp=/scratch/exter/camus/DATASET/SIMPLE/Run/test_avbp_200iter_m1-36_bunch/tools/lprof_npsu_run_5 #
# Loops | Cluster-wide | maqao lprof -dl xp=/scratch/exter/camus/DATASET/SIMPLE/Run/test_avbp_200iter_m1-36_bunch/tools/lprof_npsu_run_5 #
# Loops | Per-node | maqao lprof -dl -dn xp=/scratch/exter/camus/DATASET/SIMPLE/Run/test_avbp_200iter_m1-36_bunch/tools/lprof_npsu_run_5 #
# Loops | Per-process | maqao lprof -dl -dp xp=/scratch/exter/camus/DATASET/SIMPLE/Run/test_avbp_200iter_m1-36_bunch/tools/lprof_npsu_run_5 #
# Loops | Per-thread | maqao lprof -dl -dt xp=/scratch/exter/camus/DATASET/SIMPLE/Run/test_avbp_200iter_m1-36_bunch/tools/lprof_npsu_run_5 #
########################################################################################################################################################
* Info: Detected 36 Lprof instances in node111.
If this is incorrect, rerun with number-processes-per-node=X
__ ______ _____ __ ________ _
/\ \ / / _ \| __ \ \ \ / /____ || |
/ \ \ / /| |_) | |__) | \ \ / / / /_| | _____ __
/ /\ \ \/ / | _ <| ___/ \ \/ / / / _` |/ _ \ \ / /
/ ____ \ / | |_) | | \ / / / (_| | __/\ V /
/_/ \_\/ |____/|_| \/ /_/ \__,_|\___| \_/
Using branch :
Version date : Mon, 18 Nov 2024 11:40:50 +0100
Commit : b58af1ea20
MPI processes : 36
Computation #1/1
Compilation info : mpiifort -g -O3 -fpp -traceback -fno-alias -ip -assume byterecl -convert big_endian -align -march=core-avx2 -fma -axCORE-AVX2 -I/softs/local_intel/phdf5/1.8.20/include -DHAS_PMETIS -I/softs/local_intel/parmetis/403_64/include -DPARMETIS4 -DMETIS5 -DHAS_PTSCOTCH -I/softs/local_intel/ptscotch/6.0.5a/include
Compilation wrapper info :
Compilation user : camus
Compilation date : 2025-01-13 17:18:55
Compilation MPI version : Intel(R) MPI Library for Linux* OS, Version 2021.10 Build 20230619 (id: c2e19c2f3e)
AVBP version : 7.15.0
Reading input file version : 7.15.0
----> Reading run parameters : .//run.params
----> Using NATURAL reordering
----> command.dat file API is enabled
----> Using TTGC
with UNCLOSED boundary terms
----> Using colin viscosity model
>>>>> WARNING
>>>>> No solution storage required: additional variables are deactivated!
>>>>> WARNING
>>>>> Temporals are not computed!
----> Reading mesh : .//../Mesh/Bench_simple.mesh.h5
Meshfile signature: e736f2c3c25f98227815b524d9568f9e
----> el2part file found: el2part_36.h5
Use existing partitioning
>> Reading ...took 0.044s
----> Initialize the solution writers (36 writers)
>>>>> WARNING
>>>>> No instantaneous solution storage required: the calculation of additional variables is deactivated.
Checking TFLES table parameters...
Flame thickening is applied with fthick = 17.00
----> Reading boundary conditions in asciibound file : .//../Mesh/Bench_simple.asciiBound.key
_______________________________________________________________________________________
| Boundary patches (no reordering) |
|______________________________________________________________________________________|
| Patch number Patch name Boundary condition |
| ------------ ---------- ------------------ |
| 1 INLET INLET_RELAX_UVW_T_Y |
| 2 OUTLET OUTLET_RELAX_P |
| 3 WALL WALL_NOSLIP_ADIAB |
|______________________________________________________________________________________|
______________________________________________________________
| Info on initial grid |
|_____________________________________________________________|
| number of dimensions : 3 |
| number of nodes : 514475 |
| number of cells : 2958592 |
| - tetrahedra : 2958592 |
| number of cell per group : 64 |
| number of boundary nodes : 48048 |
| number of periodic nodes : 0 |
| number of axi-periodic nodes : 0 |
|_____________________________________________________________|
| After partitioning |
|_____________________________________________________________|
| number of nodes : 562245 |
| extra nodes due to partitioning : 47770 [+ 9.29‰] |
|_____________________________________________________________|
______________________________________________________________
| Partitioning Quality |
|_____________________________________________________________|
| Maximum number of neighbors : 13.00 |
| Average number of neighbors : 7.67 |
| Maximum number of exchange nodes : 3979.00 |
| Average number of exchange nodes : 2586.89 |
|_____________________________________________________________|
----> Reading initial solution : .//../Mesh/Bench_simple.h5
----> Reading took 0.031s
______________________________________________________________
| Info on chemistry |
|_____________________________________________________________|
| Kinetic scheme : CH4-AIR-2S-CM2_FLAMMABLE |
| Validity range : 300K/1bar |
| |
| Chemical reaction #1 |
| fthick : 1.70000000E+01 |
| Preexponential / fthick [SI] : 2.00000000E+09 |
| Activation temperature [K] : 1.76130282E+04 |
| |
| Chemical reaction #2 |
| fthick : 1.70000000E+01 |
| Preexponential / fthick [SI] : 2.00000000E+06 |
| Activation temperature [K] : 6.03875251E+03 |
|_____________________________________________________________|
______________________________________________________________
| Info on initial solution |
|_____________________________________________________________|
| number of Navier-Stokes equations : 5 |
| number of species : 6 |
| number of reactions : 2 |
| number of tpf equations : 0 |
| number of fictive species : 0 |
| initial iteration : 0 |
| initial time : 0.00000000E+00 |
|_____________________________________________________________|
----> Reading solutbound : .//../Mesh/Bench_simple.solutBound.h5
- Using 6.X format
----> Reading took 0.002s
----> Initialising metrics
----> Total volume of the mesh [m3] : 1.44077204E-01
----> Smallest cell volume [m3] : 2.97811897E-11
----> Found cached wall distance computation. Checking: ./ywall.h5
> Signatures match
----> Reading cached wall distance computation: ./ywall.h5
----> Reading took 0.004s
----> Boundary MPIs: 34
----> End pre-processing.
________________________________________________________________________________________________________
----> Starts the temporal loop.
----> End computation.
________________________________________________________________________________________________________
____________________________________________________________________________________________
| 36 MPI tasks Elapsed real time [s] [s.cores] [h.cores] |
|___________________________________________________________________________________________|
| AVBP : 76.78 2.7642E+03 7.6782E-01 |
| Temporal loop : 75.53 2.7190E+03 7.5528E-01 |
| Per simulated second : 1.5283E+06 5.5020E+07 1.5283E+04 |
| Per iteration : 0.3776 1.3595E+01 |
|-------------------------------------------------------------------------------------------|
| RCT [s.mpi/node/it] : 2.64251225E-05 |
|___________________________________________________________________________________________|
----> Initial physical time : 0.00000000E+00
Initial iteration : 0
Initial timestep : 2.46481884E-07
----> Final physical time : 4.94188563E-05
Final iteration : 200
Final timestep : 2.47527782E-07
----> Simulated physical time : 4.94188563E-05
Simulated iterations : 200
________________________________________________________________________________________________________
TIMERS
________________________________________________________________________________________________________
Prints relevant timers and breaks down percentage regarding reference timers.
> The 'Total slave simulation' time corresponds to the 1st level, and is measured by slave_timer (sum of pre temporal loop, temporal loop and post temporal loop).
> The 'Computation' time corresponds to the time integration loops, and is measured by rungekutta_timer.
> Levels are depicted using [X.Y.Z. ...] lists. The number of entry in the list corresponds to the level.
> References to the upper level is made to compute the contribution of one sub-level to its parent level.
> The times displayed are those of the master processor.
> For each timer, the minimum, maximum and mean values for all processors are also shown in the 3 right-hand columns.
> A json file 'timers.json' containing all the data is also available in the temporal output directory.
----- 1st level timers
time [s] | relative to [ min [s] mean [s] max [s] ]
| tot. slave [%] [ ]
> [0] Total slave simulation : 7.6782E+01 | 100.00% [ 7.6780E+01 7.6782E+01 7.6783E+01 ]
----- 2nd level timers
time [s] | relative to [ min [s] mean [s] max [s] ]
| tot. slave [%] [ ]
> > [0.1] Pre temporal loop : 1.2481E+00 | 1.63% [ 1.2455E+00 1.2460E+00 1.2481E+00 ]
> > [0.2] Temporal loop : 7.5528E+01 | 98.37% [ 7.5528E+01 7.5528E+01 7.5529E+01 ]
> > [0.2a] Temporal loop without IO : 7.5528E+01 | 98.37% [ 7.5528E+01 7.5528E+01 7.5529E+01 ]
> > [0.3] Post temporal loop : 5.6465E-03 | 0.01% [ 3.0382E-03 5.6536E-03 7.3829E-03 ]
> > [0.4] Point to Point communications : 2.3912E+00 | 3.11% [ 2.0468E+00 6.1031E+00 1.8712E+01 ]
----- 3rd level timers
time [s] | relative to | relative to [ min [s] mean [s] max [s] ]
| tot. slave [%] | upper level [%] [ ]
> > [0.1] Pre temporal loop : 1.2481E+00 | 1.63% [ 1.2455E+00 1.2460E+00 1.2481E+00 ]
> > > [0.1.1] Build online postprocessing objects : 0.0000E+00 | 0.00% | 0.00% [ 0.0000E+00 0.0000E+00 0.0000E+00 ]
> > [0.2] Temporal loop : 7.5528E+01 | 98.37% [ 7.5528E+01 7.5528E+01 7.5529E+01 ]
> > > [0.2.1] Computation : 7.4847E+01 | 97.48% | 99.10% [ 7.4486E+01 7.5147E+01 7.5451E+01 ]
> > > [0.2.2] Temporal post-processing : 0.0000E+00 | 0.00% | 0.00% [ 0.0000E+00 0.0000E+00 0.0000E+00 ]
> > > [0.2.3] Instantaneous solution post-processing : 0.0000E+00 | 0.00% | 0.00% [ 0.0000E+00 0.0000E+00 0.0000E+00 ]
> > > [0.2.4] Average solution post-processing : 0.0000E+00 | 0.00% | 0.00% [ 0.0000E+00 0.0000E+00 0.0000E+00 ]
> > > [0.2.5] Online post-processing compute and storage : 0.0000E+00 | 0.00% | 0.00% [ 0.0000E+00 0.0000E+00 0.0000E+00 ]
----- 4th level timers: focus on Computation level (rungekutta_timer)
time [s] | relative to | relative to | relative to [ min [s] mean [s] max [s] ]
| tot. slave [%] | computation [%]| upper level [%][ ]
> > > [0.2.1] Computation : 7.4847E+01 | 97.48% | 100.00% [ 7.4486E+01 7.5147E+01 7.5451E+01 ]
> > > > [0.2.1.1] Convective scheme : 9.1070E+00 | 11.86% | 12.17% | 12.17% [ 7.9278E+00 9.3843E+00 1.0214E+01 ]
> > > > [0.2.1.2] Diffusion operator : 2.2126E+01 | 28.82% | 29.56% | 29.56% [ 1.7769E+01 2.1272E+01 2.2286E+01 ]
> > > > [0.2.1.4] Time-step calculation : 1.7257E+00 | 2.25% | 2.31% | 2.31% [ 1.6600E+00 1.7118E+00 1.9288E+00 ]
> > > > [0.2.1.5] Transport calculation : 5.6016E-01 | 0.73% | 0.75% | 0.75% [ 3.8474E-01 5.5316E-01 5.9487E-01 ]
> > > > [0.2.1.6] Thermo calculation : 6.7152E-01 | 0.87% | 0.90% | 0.90% [ 5.3557E-01 6.9223E-01 7.5379E-01 ]
> > > > [0.2.1.7] Gradient calculation : 7.6860E+00 | 10.01% | 10.27% | 10.27% [ 7.0060E+00 7.7230E+00 8.1952E+00 ]
> > > > [0.2.1.8] Boundary : 2.1348E+00 | 2.78% | 2.85% | 2.85% [ 3.5239E-01 1.0771E+00 2.2471E+00 ]
> > > > [0.2.1.9] Turbulent viscosity model : 1.4915E+00 | 1.94% | 1.99% | 1.99% [ 1.5186E+00 1.6531E+00 1.7504E+00 ]
> > > > [0.2.1.10] Combustion (source term + TFLES + efcy + efcy I0) : 7.0690E+00 | 9.21% | 9.44% | 9.44% [ 6.7648E+00 7.0242E+00 7.3526E+00 ]
> > > > > [0.2.1.10.1] Chemical source terms calculation : 5.4694E+00 | 7.12% | 7.31% | 77.37% [ 5.2701E+00 5.4497E+00 5.6200E+00 ]
> > > > > [0.2.1.10.2] TFLES model calculation : 0.0000E+00 | 0.00% | 0.00% | 0.00% [ 0.0000E+00 0.0000E+00 0.0000E+00 ]
> > > > > [0.2.1.10.3] Efficiency function calculation : 1.5996E+00 | 2.08% | 2.14% | 22.63% [ 1.4947E+00 1.5745E+00 1.7326E+00 ]
> > > > > [0.2.1.10.4] Efficiency I0 function calculation : 0.0000E+00 | 0.00% | 0.00% | 0.00% [ 0.0000E+00 0.0000E+00 0.0000E+00 ]
> > > > [0.2.1.11] Artificial viscosity : 7.6548E+00 | 9.97% | 10.23% | 10.23% [ 6.2377E+00 7.4965E+00 8.0340E+00 ]
> > > > [0.2.1.17] Source terms : 0.0000E+00 | 0.00% | 0.00% | 0.00% [ 0.0000E+00 0.0000E+00 0.0000E+00 ]
----> End of AVBP session
----> Found 3 warning messages for this computation, check your output file!
***** Memory usage (system): Max: 388.922 MB (rank:35) Min: 274.797 MB (rank:0) Ave: 314.335 MB Std: 25.306 MB
***** Maximum memory (mod_alloc) : 62842288 B ( 5.993108E+01 MB)
Info: 35/36 lprof instances finished
IPL WARN> unknown option 'bunch'
Info: Detected stop signals that could make lprof alter execution. In case of issues, rerun with lprof-params="-verbose" for more information.
Your experiment path is /scratch/exter/camus/DATASET/SIMPLE/Run/test_avbp_200iter_m1-36_bunch/tools/lprof_npsu_run_6
To display your profiling results:
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# LEVEL | REPORT | COMMAND #
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# Functions | Cluster-wide | maqao lprof -df xp=/scratch/exter/camus/DATASET/SIMPLE/Run/test_avbp_200iter_m1-36_bunch/tools/lprof_npsu_run_6 #
# Functions | Per-node | maqao lprof -df -dn xp=/scratch/exter/camus/DATASET/SIMPLE/Run/test_avbp_200iter_m1-36_bunch/tools/lprof_npsu_run_6 #
# Functions | Per-process | maqao lprof -df -dp xp=/scratch/exter/camus/DATASET/SIMPLE/Run/test_avbp_200iter_m1-36_bunch/tools/lprof_npsu_run_6 #
# Functions | Per-thread | maqao lprof -df -dt xp=/scratch/exter/camus/DATASET/SIMPLE/Run/test_avbp_200iter_m1-36_bunch/tools/lprof_npsu_run_6 #
# Loops | Cluster-wide | maqao lprof -dl xp=/scratch/exter/camus/DATASET/SIMPLE/Run/test_avbp_200iter_m1-36_bunch/tools/lprof_npsu_run_6 #
# Loops | Per-node | maqao lprof -dl -dn xp=/scratch/exter/camus/DATASET/SIMPLE/Run/test_avbp_200iter_m1-36_bunch/tools/lprof_npsu_run_6 #
# Loops | Per-process | maqao lprof -dl -dp xp=/scratch/exter/camus/DATASET/SIMPLE/Run/test_avbp_200iter_m1-36_bunch/tools/lprof_npsu_run_6 #
# Loops | Per-thread | maqao lprof -dl -dt xp=/scratch/exter/camus/DATASET/SIMPLE/Run/test_avbp_200iter_m1-36_bunch/tools/lprof_npsu_run_6 #
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